RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 MAP3K7CLP57077 242 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 POU6F2P78424 691 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CES4AQ5XG92 561 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CCBE1Q6UXH8 406 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CATSPER3Q86XQ3 398 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 SIX6OS1Q8N1H7 587 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CERS5Q8N5B7 392 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 APPL2Q8NEU8 664 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 TXNDC15Q96J42 360 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CITED4Q96RK1 184 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF347Q96SE7 839 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 IL12RB2Q99665 862 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 MTMR12Q9C0I1 747 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 VANGL2Q9ULK5 521 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 STRIP2Q9ULQ0 834 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 AFG3L2Q9Y4W6 797 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 ARPC4-TTLL3A0A0A6YYG9 625 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CLIC2O15247 247 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 ASNA1O43681 348 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 LPXNO60711 386 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 NDUFS2O75306 463 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF254O75437 659 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 DHRS4L1P0CG22 281 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 MSX2P35548 267 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-201ENST00000328923 ATXN3P54252 364 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-201ENST00000328923 GNA13Q14344 377 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 DSC3Q14574 896 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 PPP2R5DQ14738 602 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CBWD6Q4V339 395 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CBWD3Q5JTY5 395 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CBWD5Q5RIA9 395 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 SLX4IPQ5VYV7 408 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 NXNQ6DKJ4 435 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CHSY1Q86X52 802 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF564Q8TBZ8 553 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-201ENST00000328923 GJA10Q969M2 543 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 BTBD6Q96KE9 485 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 MECRQ9BV79 373 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 OSBPL11Q9BXB4 747 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.12□□□□□ -0.47
SHMT2-201ENST00000328923 DMAC2Q9NW81 257 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 MOCS1Q9NZB8 636 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 UBA2Q9UBT2 640 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-201ENST00000328923 MAU2Q9Y6X3 613 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 CCDC195A0A1B0GUA6 201 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 CLDN25C9JDP6 229 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 FOXN3O00409 490 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-201ENST00000328923 SLC22A1O15245 554 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 SPAG6O75602 509 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 KRT3P12035 628 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 CCNA2P20248 432 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 ETV4P43268 484 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 HK2P52789 917 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 MAPK11Q15759 364 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 PLEKHG7Q6ZR37 379 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 SLC22A16Q86VW1 577 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 LURAP1LQ8IV03 231 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 HERC6Q8IVU3 1022 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 FAM47BQ8NA70 645 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 ZSWIM2Q8NEG5 633 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 LMO3Q8TAP4 145 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 SLC20A1Q8WUM9 679 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 SH3YL1Q96HL8 342 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-201ENST00000328923 CCSER2Q9H7U1 834 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 CEP350Q5VT06 3117 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 ACOX3O15254 700 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 SPATA31C1P0DKV0 1188 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 ITIH1P19827 911 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 SSTR3P32745 418 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-201ENST00000328923 GPD2P43304 727 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 PRAMEP78395 509 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 TAGLNQ01995 201 aaKnown RBP12.11□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF846Q147U1 533 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 KCTD20Q7Z5Y7 419 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 ANKS1BQ7Z6G8 1248 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 TMEM126BQ8IUX1 230 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF786Q8N393 782 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 ZCCHC9Q8N567 271 aaKnown RBP12.11□□□□□ -0.47
SHMT2-201ENST00000328923 OR2B2Q9GZK3 357 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 JMJD4Q9H9V9 463 aa12.11□□□□□ -0.47
SHMT2-201ENST00000328923 LOC100653049A0A140TA62 436 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 SDR42E2A6NKP2 422 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 GAS7O60861 476 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 BANF1O75531 89 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 KRT34O76011 436 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 ALDH1A2O94788 518 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 NADKO95544 446 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-201ENST00000328923 DBTP11182 482 aaKnown RBP12.1□□□□□ -0.47
SHMT2-201ENST00000328923 BST1Q10588 318 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 POU6F1Q14863 301 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 MGAT5BQ3V5L5 792 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 TBC1D10BQ4KMP7 808 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-201ENST00000328923 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-201ENST00000328923 FAM122CQ6P4D5 195 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 CADM2Q8N3J6 435 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 LEMD2Q8NC56 503 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 ETNPPLQ8TBG4 499 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 SLC7A3Q8WY07 619 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms