RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ERCC2P18074 760 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 NIPAL4Q0D2K0 466 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 KBTBD2Q8IY47 623 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 PLD6Q8N2A8 252 aaKnown RBP14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 SLC26A7Q8TE54 656 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 HSFY1Q96LI6 401 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 ZNF560Q96MR9 790 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 SNX15Q9NRS6 342 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 MKS1Q9NXB0 559 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 NDE1Q9NXR1 346 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 STAP1Q9ULZ2 295 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 SOX13Q9UN79 622 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 LRCH1Q9Y2L9 728 aa14.4□□□□□ -0.1
ATP2C1-201ENST00000328560 PAPPA2Q9BXP8 1791 aa14.4□□□□□ -0.11
ATP2C1-201ENST00000328560 HACD1B0YJ81 288 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 MAGEC1O60732 1142 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 GSRP00390 522 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 GP5P40197 560 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 GARSP41250 739 aaKnown RBP14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 CERCAMQ5T4B2 595 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 TWF2Q6IBS0 349 aaKnown RBP14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 IZUMO2Q6UXV1 221 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 ATG14Q6ZNE5 492 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 PLEKHH3Q7Z736 793 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 USP33Q8TEY7 942 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 EDEM1Q92611 657 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 MFSD3Q96ES6 412 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 PPM1HQ9ULR3 514 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 USP3Q9Y6I4 520 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 WDR90Q96KV7 1748 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 GOLGA8QA0A0J9YX86 632 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 GOLGA8OA6NCC3 632 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 GOLGA8NF8WBI6 632 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 NRP1O14786 923 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 DCXO43602 365 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 SIN3BO75182 1162 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 SMIM10L2AP0DMW4 78 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 SMIM10L2BP0DMW5 78 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 DARSP14868 501 aaKnown RBP14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 TPI1P60174 286 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 GPR162Q16538 588 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 NAIF1Q69YI7 327 aaPredicted RBP14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 TIFABQ6ZNK6 161 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 ULBP1Q9BZM6 244 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 KRT82Q9NSB4 513 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 BFARQ9NZS9 450 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 COPG2Q9UBF2 871 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 DERAQ9Y315 318 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 PTPRFP10586 1907 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 NEMP1O14524 444 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 ZCCHC18P0CG32 403 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 NCAM1P13591 858 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 MX2P20592 715 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 ARRB2P32121 409 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 RAP1GDS1P52306 607 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 AP2B1P63010 937 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 CUL3Q13618 768 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 TRMT5Q32P41 509 aaKnown RBP14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 IQSEC1Q6DN90 963 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 RAPH1Q70E73 1250 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 RNF169Q8NCN4 708 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 PARK7Q99497 189 aaKnown RBP14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 UNKQ9C0B0 810 aaKnown RBP14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 VANGL2Q9ULK5 521 aa14.39□□□□□ -0.11
ATP2C1-201ENST00000328560 A6NHS1 94 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 PIRO00625 290 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 SMIM24O75264 130 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 GPR32O75388 356 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 MLNP12872 115 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 NOS2P35228 1153 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 IDH3AP50213 366 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 COPAP53621 1224 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 LILRA4P59901 499 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 IRF9Q00978 393 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 PDPK2PQ6A1A2 396 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 SMYD5Q6GMV2 418 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 RNF34Q969K3 372 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 CELF6Q96J87 481 aaKnown RBP14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 KCNK16Q96T55 309 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 DUSP16Q9BY84 665 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 VCXQ9H320 206 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 DDIT4Q9NX09 232 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 ZNF212Q9UDV6 495 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 SCOCQ9UIL1 159 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 XPO1O14980 1071 aaKnown RBP14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 ZBTB24O43167 697 aaPredicted RBP14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 ALDH1A2O94788 518 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 NPR3P17342 541 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 PTPN1P18031 435 aaKnown RBP14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 TCHHL1Q5QJ38 904 aaPredicted RBP14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 RNF220Q5VTB9 566 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 STEAP4Q687X5 459 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 NET1Q7Z628 596 aaPredicted RBP14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 WNT8BQ93098 351 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 MAML3Q96JK9 1138 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 ZNF184Q99676 751 aaPredicted RBP14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 C20orf96Q9NUD7 363 aaPredicted RBP14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 PLA2G4CQ9UP65 541 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 A0A096LPK6 155 aa14.38□□□□□ -0.11
ATP2C1-201ENST00000328560 USP17L7P0C7H9 530 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms