RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 GRIA2P42262 883 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 COPAP53621 1224 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 WASHC5Q12768 1159 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 ARMC3Q5W041 872 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 CATSPER4Q7RTX7 472 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 PIGZQ86VD9 579 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 GDPD5Q8WTR4 605 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 SPATA13Q96N96 652 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 QKIQ96PU8 341 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLGN-201ENST00000325617 LENG8Q96PV6 779 aaPredicted RBP13.44□□□□□ -0.26
CLGN-201ENST00000325617 KLHL8Q9P2G9 620 aaPredicted RBP13.44□□□□□ -0.26
CLGN-201ENST00000325617 COPG2Q9UBF2 871 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 HSPA4LO95757 839 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 CPA3P15088 417 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 TSHRP16473 764 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 HOXA11P31270 313 aaPredicted RBP13.44□□□□□ -0.26
CLGN-201ENST00000325617 GNL1P36915 607 aaPredicted RBP13.44□□□□□ -0.26
CLGN-201ENST00000325617 ARL4AP40617 200 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 NIPAL4Q0D2K0 466 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 SEMA5AQ13591 1074 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 DPYSL2Q16555 572 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 PRAMEF19Q5SWL8 479 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 NXNQ6DKJ4 435 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 MCUQ8NE86 351 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 EDEM1Q92611 657 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 CDH22Q9UJ99 828 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 POMPQ9Y244 141 aa13.44□□□□□ -0.26
CLGN-201ENST00000325617 MAGEA13PA6NCF6 341 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 MEIS3P2A8K0S8 358 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 RECQL4O94761 1208 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 MT-CO1P00395 513 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 ATICP31939 592 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 IRX1P78414 480 aaPredicted RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 TBL3Q12788 808 aaKnown RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 TTLL4Q14679 1199 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 TRMT5Q32P41 509 aaKnown RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 FSTL4Q6MZW2 842 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 MTHFD1LQ6UB35 978 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 TRIM42Q8IWZ5 723 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 RNF139Q8WU17 664 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 KBTBD7Q8WVZ9 684 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 IFT43Q96FT9 208 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 NUF2Q9BZD4 464 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 MMADHCQ9H3L0 296 aaPredicted RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 ATXN3LQ9H3M9 355 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 IARS2Q9NSE4 1012 aaKnown RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 SLC39A10Q9ULF5 831 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 H3BRB1 525 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 ZNF195O14628 629 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 NRP1O14786 923 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 MDM4O15151 490 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 NELFEP18615 380 aaKnown RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 AFF1P51825 1210 aaKnown RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 ABCE1P61221 599 aaKnown RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 IFRD2Q12894 506 aaPredicted RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 LBRQ14739 615 aaKnown RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 OSTM1Q86WC4 334 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 KCNK16Q96T55 309 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 TUT1Q9H6E5 874 aaKnown RBP13.43□□□□□ -0.26
CLGN-201ENST00000325617 PIGVQ9NUD9 493 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLGN-201ENST00000325617 ITGA11Q9UKX5 1188 aa13.43□□□□□ -0.26
CLGN-201ENST00000325617 TTC36A6NLP5 189 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 ZBTB24O43167 697 aaPredicted RBP13.42□□□□□ -0.26
CLGN-201ENST00000325617 SH3D19Q5HYK7 790 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 MARCH8Q5T0T0 291 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 OTUD1Q5VV17 481 aaPredicted RBP13.42□□□□□ -0.26
CLGN-201ENST00000325617 FBXL19Q6PCT2 694 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 KCNN1Q92952 543 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 CATSPER2Q96P56 530 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 OCEL1Q9H607 264 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 A0A096LPK6 155 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 SERPINE1P05121 402 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 NUDT2P50583 147 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 MAP3K7CLP57077 242 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 TNFAIP2Q03169 654 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 DNAL1Q4LDG9 190 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 OTOP3Q7RTS5 596 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 DHDDSQ86SQ9 333 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 GALNT4Q8N4A0 578 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 NPWQ8N729 165 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 OR6Y1Q8NGX8 325 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 SLC7A14Q8TBB6 771 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 CERS2Q96G23 380 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 ZFP42Q96MM3 310 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 TRIM4Q9C037 500 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 SUDS3Q9H7L9 328 aaPredicted RBP13.42□□□□□ -0.26
CLGN-201ENST00000325617 RPL26L1Q9UNX3 145 aaKnown RBP13.42□□□□□ -0.26
CLGN-201ENST00000325617 A0A1B0GTW7 788 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 KLHL33A6NCF5 533 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 GLRA3O75311 464 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 HDCP19113 662 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 TPSB2P20231 275 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 MRPS22P82650 360 aaKnown RBP13.42□□□□□ -0.26
CLGN-201ENST00000325617 TPSAB1Q15661 275 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 PDCD2Q16342 344 aaPredicted RBP13.42□□□□□ -0.26
CLGN-201ENST00000325617 SNX32Q86XE0 403 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 ZSCAN18Q8TBC5 510 aaPredicted RBP13.42□□□□□ -0.26
CLGN-201ENST00000325617 TMEM40Q8WWA1 233 aa13.42□□□□□ -0.26
CLGN-201ENST00000325617 NMD3Q96D46 503 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms