RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 CNGA3Q16281 694 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 IMPG1Q17R60 797 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 UBAP2Q5T6F2 1119 aaKnown RBP12.09□□□□□ -0.47
DDR1-223ENST00000324771 LRRC8EQ6NSJ5 796 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 LINC00523Q86TU6 105 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 SNX27Q96L92 541 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 YIPF3Q9GZM5 350 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 PPCSQ9HAB8 311 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 SYBUQ9NX95 663 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 CD274Q9NZQ7 290 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 LSM7Q9UK45 103 aaKnown RBP12.09□□□□□ -0.47
DDR1-223ENST00000324771 DSEQ9UL01 958 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 SLC2A3P11169 496 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 CDC25CP30307 473 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 NR2C2P49116 596 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 TIGD5Q53EQ6 642 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 FAM43BQ6ZT52 329 aaPredicted RBP12.09□□□□□ -0.47
DDR1-223ENST00000324771 ATP13A1Q9HD20 1204 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 ANLNQ9NQW6 1124 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 NDE1Q9NXR1 346 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 FAM50BQ9Y247 325 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 LYPLA1O75608 230 aaPredicted RBP12.09□□□□□ -0.47
DDR1-223ENST00000324771 ATG7O95352 703 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 CD86P42081 329 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 MMP13P45452 471 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 NUDT2P50583 147 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 OXCT1P55809 520 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 POLE2P56282 527 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 PITX1P78337 314 aaPredicted RBP12.09□□□□□ -0.47
DDR1-223ENST00000324771 BST1Q10588 318 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 SPDYAQ5MJ70 313 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 ICA1LQ8NDH6 482 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 AZIN2Q96A70 460 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 APOPT1Q96IL0 206 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 NAT9Q9BTE0 207 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 ILKAPQ9H0C8 392 aaPredicted RBP12.09□□□□□ -0.47
DDR1-223ENST00000324771 ACSS3Q9H6R3 686 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 MFHAS1Q9Y4C4 1052 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 XPO1O14980 1071 aaKnown RBP12.09□□□□□ -0.47
DDR1-223ENST00000324771 UGT1A9O60656 530 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 AOC2O75106 756 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 TBX18O95935 607 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 PIGRP01833 764 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 OR1D2P34982 312 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 GJA5P36382 358 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 LBRQ14739 615 aaKnown RBP12.09□□□□□ -0.47
DDR1-223ENST00000324771 FAM83EQ2M2I3 478 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 SLC25A52Q3SY17 297 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 PPM1JQ5JR12 505 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 TMEM86AQ8N2M4 240 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 ZNF670Q9BS34 389 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 ARHGAP39Q9C0H5 1083 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 XYLT2Q9H1B5 865 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 UGT1A7Q9HAW7 530 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 UGT1A10Q9HAW8 530 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 UGT1A8Q9HAW9 530 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 OLA1Q9NTK5 396 aaKnown RBP12.09□□□□□ -0.47
DDR1-223ENST00000324771 ANGPTL2Q9UKU9 493 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 CDH9Q9ULB4 789 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 SLC8A2Q9UPR5 921 aa12.09□□□□□ -0.47
DDR1-223ENST00000324771 DUSP11O75319 330 aaKnown RBP12.08□□□□□ -0.48
DDR1-223ENST00000324771 LGR5O75473 907 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 CCNB1P14635 433 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 RAG1P15918 1043 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 RAB27AP51159 221 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 TUSC3Q13454 348 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 TAPT1Q6NXT6 567 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 C4orf22Q6V702 233 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 SZRD1Q7Z422 152 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 LDB1Q86U70 411 aaPredicted RBP12.08□□□□□ -0.48
DDR1-223ENST00000324771 CIR1Q86X95 450 aaPredicted RBP12.08□□□□□ -0.48
DDR1-223ENST00000324771 AGGF1Q8N302 714 aaeCLIP12.08□□□□□ -0.485e-7■■■■■ 43.7
DDR1-223ENST00000324771 GALNT4Q8N4A0 578 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 OR6K2Q8NGY2 324 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 RSPH1Q8WYR4 309 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 MFSD3Q96ES6 412 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 SPATA17Q96L03 361 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 C16orf70Q9BSU1 422 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 TLR8Q9NR97 1041 aaKnown RBP12.08□□□□□ -0.48
DDR1-223ENST00000324771 TMEM39AQ9NV64 488 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 TMEM59LQ9UK28 342 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 SCN9AQ15858 1988 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 SRP72O76094 671 aaKnown RBP12.08□□□□□ -0.48
DDR1-223ENST00000324771 TRIM16O95361 564 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 METTL18O95568 372 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 MT-CYBP00156 380 aaPredicted RBP12.08□□□□□ -0.48
DDR1-223ENST00000324771 ALDH1A1P00352 501 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 INHBEP58166 350 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 RCN1Q15293 331 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 THEMIS2Q5TEJ8 643 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 DBF4BQ8NFT6 615 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 NKD2Q969F2 451 aaPredicted RBP12.08□□□□□ -0.48
DDR1-223ENST00000324771 NCLNQ969V3 563 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 MARK4Q96L34 752 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 EBNA1BP2Q99848 306 aaKnown RBP12.08□□□□□ -0.48
DDR1-223ENST00000324771 LMCD1Q9NZU5 365 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 GSTA4O15217 222 aa12.08□□□□□ -0.48
DDR1-223ENST00000324771 ZBTB24O43167 697 aaPredicted RBP12.08□□□□□ -0.48
DDR1-223ENST00000324771 DCXO43602 365 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms