RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PGM3O95394 542 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 LGALS2P05162 132 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 MLNP12872 115 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 LHX1P48742 406 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 FASTKQ14296 549 aaKnown RBP15.04■□□□□ -0
TCOF1-201ENST00000323668 GALNTL6Q49A17 601 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 ZNF470Q6ECI4 717 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 ISLR2Q6UXK2 745 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 PIGZQ86VD9 579 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
TCOF1-201ENST00000323668 P2RY11Q96G91 374 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 B3GNT5Q9BYG0 378 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 S100A14Q9HCY8 104 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 DDX43Q9NXZ2 648 aaKnown RBP15.04■□□□□ -0
TCOF1-201ENST00000323668 TSR3Q9UJK0 312 aaKnown RBP15.04■□□□□ -0
TCOF1-201ENST00000323668 AP4S1Q9Y587 144 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 ALBP02768 609 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 HMOX2P30519 316 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 NME5P56597 212 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 IL31Q6EBC2 164 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 SLC22A9Q8IVM8 553 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 BHLHE22Q8NFJ8 381 aaPredicted RBP15.04■□□□□ -0
TCOF1-201ENST00000323668 SYT11Q9BT88 431 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 TRPC7Q9HCX4 862 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 CLIC5Q9NZA1 410 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 CCDC167Q9P0B6 97 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 BLOC1S6Q9UL45 172 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 RECQL4O94761 1208 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 PIGRP01833 764 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 IL1R2P27930 398 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 INSCQ1MX18 579 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 ZDHHC14Q8IZN3 488 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 ZSCAN18Q8TBC5 510 aaPredicted RBP15.04■□□□□ -0
TCOF1-201ENST00000323668 DCAKDQ8WVC6 231 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 SYT15Q9BQS2 421 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 RIC8BQ9NVN3 520 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 RHBDL2Q9NX52 303 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 RAP2CQ9Y3L5 183 aa15.04■□□□□ -0
TCOF1-201ENST00000323668 TCRBV7S3A2A0A539 114 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 TTC36A6NLP5 189 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 TBX10O75333 385 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 IVDP26440 423 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 ETFBP38117 255 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 XIAPP98170 497 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 TSTA3Q13630 321 aaPredicted RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 CAPRIN1Q14444 709 aaKnown RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 MAPRE1Q15691 268 aaKnown RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 B4GALNT2Q8NHY0 566 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 RNF19AQ9NV58 838 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 LRFN2Q9ULH4 789 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 COMMD3-BMI1R4GMX3 469 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 V9GYQ6 96 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 TMEM114B3SHH9 223 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 MRASO14807 208 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 SMNDC1O75940 238 aaKnown RBP eCLIP15.03■□□□□ -0
TCOF1-201ENST00000323668 RHOBTB1O94844 696 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 LYNP07948 512 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 RPL5P46777 297 aaKnown RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 RP9Q8TA86 221 aaKnown RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 CSPG4P5Q96PW8 444 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 EPB41L4BQ9H329 900 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 DMAP1Q9NPF5 467 aaPredicted RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 SYBUQ9NX95 663 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 C6orf203Q9P0P8 240 aaPredicted RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 ZNF536O15090 1300 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 C2CD4BA6NLJ0 364 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 NR5A2O00482 541 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 MGEA5O60502 916 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 HMBSP08397 361 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 ARF4P18085 180 aaPredicted RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 GRIA4P48058 902 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 ZNF333Q96JL9 665 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 PLA2G4CQ9UP65 541 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 WASF2Q9Y6W5 498 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 C10orf71Q711Q0 1435 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 UQCRBP14927 111 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 EPHA3P29320 983 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 ICAM3P32942 547 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 MATKP42679 507 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 CSE1LP55060 971 aaKnown RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 OGDHQ02218 1023 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 PRKD1Q15139 912 aaPredicted RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 TMTC4Q5T4D3 741 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 BLOC1S5Q8TDH9 187 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 RMND5BQ96G75 393 aaPredicted RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 PRKD2Q9BZL6 878 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 ULBP1Q9BZM6 244 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 GRIP2Q9C0E4 1043 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 NDFIP2Q9NV92 336 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 COPG2Q9UBF2 871 aa15.03■□□□□ -0
TCOF1-201ENST00000323668 PRPF19Q9UMS4 504 aaKnown RBP15.03■□□□□ -0
TCOF1-201ENST00000323668 USP54Q70EL1 1684 aa15.02■□□□□ -0
TCOF1-201ENST00000323668 ZNF541Q9H0D2 1346 aa15.02■□□□□ -0
TCOF1-201ENST00000323668 KANSL1LA0AUZ9 987 aa15.02■□□□□ -0
TCOF1-201ENST00000323668 CXCL11O14625 94 aa15.02■□□□□ -0
TCOF1-201ENST00000323668 SIN3BO75182 1162 aa15.02■□□□□ -0
TCOF1-201ENST00000323668 ZBTB17Q13105 803 aa15.02■□□□□ -0
TCOF1-201ENST00000323668 LRRC8BQ6P9F7 803 aa15.02■□□□□ -0
TCOF1-201ENST00000323668 CYP2R1Q6VVX0 501 aa15.02■□□□□ -0
TCOF1-201ENST00000323668 LPCAT2Q7L5N7 544 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms