RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 HDAC4P56524 1084 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 BST1Q10588 318 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 TMEM259Q4ZIN3 620 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 RFWD3Q6PCD5 774 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 PEBP4Q96S96 227 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ARHGEF4Q9NR80 690 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ADAMTS5Q9UNA0 930 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 SUPT3HB4E1H0 165 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ZBTB24O43167 697 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 SUPT3HO75486 399 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 CNMDO75829 334 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 RHOBTB1O94844 696 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 CCNB1P14635 433 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 POLD3Q15054 466 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 RNASEH2BQ5TBB1 312 aaKnown RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 FUKQ8N0W3 1084 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 SH3BP1Q9Y3L3 701 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 TIAM2Q8IVF5 1701 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 NRP1O14786 923 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 XPO1O14980 1071 aaKnown RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 MTSS1O43312 755 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 BEST1O76090 585 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 STBD1O95210 358 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 MYL4P12829 197 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 NQO1P15559 274 aaKnown RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 STMN1P16949 149 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 EDNRBP24530 442 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 SLC11A2P49281 568 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 PGGT1BP53609 377 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 C6orf10Q5SRN2 563 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 LRRC43Q8N309 656 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 MPP5Q8N3R9 675 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 EIF1ADQ8N9N8 165 aaKnown RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 LPCAT1Q8NF37 534 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 CYP2S1Q96SQ9 504 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ACSS3Q9H6R3 686 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 AGO3Q9H9G7 860 aaKnown RBP11.25□□□□□ -0.61
TOP3A-201ENST00000321105 PDLIM7Q9NR12 457 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ACOT9Q9Y305 439 aa11.25□□□□□ -0.61
TOP3A-201ENST00000321105 ANKRD12Q6UB98 2062 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 ANKRD36CQ5JPF3 1778 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 A0A1W2PQH9 124 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 NVLO15381 856 aaKnown RBP11.24□□□□□ -0.61
TOP3A-201ENST00000321105 MAP3K7O43318 606 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 PAGE1O75459 146 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 CCND3P30281 292 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-201ENST00000321105 AKT1P31749 480 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 GP5P40197 560 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 TAF10Q12962 218 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 TUSC3Q13454 348 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 UGP2Q16851 508 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 FSCBQ5H9T9 825 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 DDX53Q86TM3 631 aaKnown RBP11.24□□□□□ -0.61
TOP3A-201ENST00000321105 OSTM1Q86WC4 334 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 HS6ST3Q8IZP7 471 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 NKD2Q969F2 451 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-201ENST00000321105 PTPN18Q99952 460 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 ZNF670Q9BS34 389 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 ATP13A1Q9HD20 1204 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 DTLQ9NZJ0 730 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 TRPM5Q9NZQ8 1165 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 CDY1Q9Y6F8 540 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 DDX60Q8IY21 1712 aaKnown RBP11.24□□□□□ -0.61
TOP3A-201ENST00000321105 CFAP73A6NFT4 308 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 SMAPO00193 183 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 FCHO1O14526 889 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 KIF3CO14782 793 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 DCXO43602 365 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 MTA2O94776 668 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 RAG1P15918 1043 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 NR2C2P49116 596 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 CDH17Q12864 832 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 BFSP2Q13515 415 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 HIC1Q14526 733 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 RBBP7Q16576 425 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 IFNL1Q8IU54 200 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 DENND1CQ8IV53 801 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 NSL1Q96IY1 281 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 ABCG8Q9H221 673 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 PIF1Q9H611 641 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 ZNF395Q9H8N7 513 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-201ENST00000321105 BPIFA1Q9NP55 256 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 PIGVQ9NUD9 493 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 CDH9Q9ULB4 789 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 AAR2Q9Y312 384 aaKnown RBP11.24□□□□□ -0.61
TOP3A-201ENST00000321105 KPNA6O60684 536 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 TKTP29401 623 aaKnown RBP11.24□□□□□ -0.61
TOP3A-201ENST00000321105 NUDT2P50583 147 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 SLC5A3P53794 718 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 FKBP1BP68106 108 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 DLG2Q15700 870 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 FAM83EQ2M2I3 478 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 CDCA2Q69YH5 1023 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-201ENST00000321105 TP53INP2Q8IXH6 220 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 APOPT1Q96IL0 206 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 GBP5Q96PP8 586 aa11.24□□□□□ -0.61
TOP3A-201ENST00000321105 EBNA1BP2Q99848 306 aaKnown RBP11.24□□□□□ -0.61
TOP3A-201ENST00000321105 OSBPL1AQ9BXW6 950 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms