RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ARRB2P32121 409 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 PEX19P40855 299 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 AFF1P51825 1210 aaKnown RBP17.85■□□□□ 0.45
COL9A1-201ENST00000320755 EPHB1P54762 984 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 CERCAMQ5T4B2 595 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 KIAA0319Q5VV43 1072 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 DPY19L2Q6NUT2 758 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 ARCQ7LC44 396 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 DCLK2Q8N568 766 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 WNT8BQ93098 351 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 NPY6RQ99463 290 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 OXCT2Q9BYC2 517 aaPredicted RBP17.85■□□□□ 0.45
COL9A1-201ENST00000320755 CPSF2Q9P2I0 782 aaKnown RBP17.85■□□□□ 0.45
COL9A1-201ENST00000320755 DCDC2Q9UHG0 476 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 SLC7A8Q9UHI5 535 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 PLXNA1Q9UIW2 1896 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 I6L893 689 aaPredicted RBP17.85■□□□□ 0.45
COL9A1-201ENST00000320755 XPOTO43592 962 aaKnown RBP17.85■□□□□ 0.45
COL9A1-201ENST00000320755 SERPINA6P08185 405 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 MYL3P08590 195 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 TPI1P60174 286 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 USP4Q13107 963 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 HIPK4Q8NE63 616 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 BRI3BPQ8WY22 251 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 HNRNPABQ99729 332 aaKnown RBP17.85■□□□□ 0.45
COL9A1-201ENST00000320755 RHOBTB2Q9BYZ6 727 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 DDIT4Q9NX09 232 aa17.85■□□□□ 0.45
COL9A1-201ENST00000320755 DDX43Q9NXZ2 648 aaKnown RBP17.85■□□□□ 0.45
COL9A1-201ENST00000320755 ZBTB24O43167 697 aaPredicted RBP17.84■□□□□ 0.45
COL9A1-201ENST00000320755 DAB1O75553 588 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 ZMPSTE24O75844 475 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 TOMM70O94826 608 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 RALBP11234 206 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 ADRA1BP35368 520 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 PNPLA4P41247 253 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 RALGPS1Q5JS13 557 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 UBXN11Q5T124 520 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 CCDC124Q96CT7 223 aaKnown RBP17.84■□□□□ 0.45
COL9A1-201ENST00000320755 CELF6Q96J87 481 aaKnown RBP17.84■□□□□ 0.45
COL9A1-201ENST00000320755 PANX3Q96QZ0 392 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 PPP1R12CQ9BZL4 782 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 SNX15Q9NRS6 342 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 CBLBQ13191 982 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 MFSD10Q14728 455 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 LDLRAD1Q5T700 205 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 C6orf163Q5TEZ5 329 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 IQSEC1Q6DN90 963 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 GPRIN1Q7Z2K8 1008 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 PPFIBP2Q8ND30 876 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 USP33Q8TEY7 942 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 SH3TC2Q8TF17 1288 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 MMADHCQ9H3L0 296 aaPredicted RBP17.84■□□□□ 0.45
COL9A1-201ENST00000320755 VANGL2Q9ULK5 521 aa17.84■□□□□ 0.45
COL9A1-201ENST00000320755 G3BP2Q9UN86 482 aaKnown RBP17.84■□□□□ 0.45
COL9A1-201ENST00000320755 DPPA5A6NC42 116 aa17.83■□□□□ 0.45
COL9A1-201ENST00000320755 AP1G2O75843 785 aa17.83■□□□□ 0.45
COL9A1-201ENST00000320755 USP1O94782 785 aa17.83■□□□□ 0.45
COL9A1-201ENST00000320755 PTPN3P26045 913 aa17.83■□□□□ 0.45
COL9A1-201ENST00000320755 GP5P40197 560 aa17.83■□□□□ 0.45
COL9A1-201ENST00000320755 GLUD2P49448 558 aa17.83■□□□□ 0.45
COL9A1-201ENST00000320755 GSTCDQ8NEC7 633 aa17.83■□□□□ 0.45
COL9A1-201ENST00000320755 YIPF3Q9GZM5 350 aa17.83■□□□□ 0.45
COL9A1-201ENST00000320755 BFARQ9NZS9 450 aa17.83■□□□□ 0.45
COL9A1-201ENST00000320755 COPG2Q9UBF2 871 aa17.83■□□□□ 0.45
COL9A1-201ENST00000320755 MYBPHLA2RUH7 354 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 SORBS2O94875 1100 aaKnown RBP17.83■□□□□ 0.44
COL9A1-201ENST00000320755 PROCP04070 461 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 SERPINE1P05121 402 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 FYNP06241 537 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 FAM200BP0CF97 657 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 CPA3P15088 417 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 TUBP50607 506 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 IRF9Q00978 393 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 NPWQ8N729 165 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 SMG8Q8ND04 991 aaKnown RBP17.83■□□□□ 0.44
COL9A1-201ENST00000320755 CHRAC1Q9NRG0 131 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 STX18Q9P2W9 335 aaKnown RBP17.83■□□□□ 0.44
COL9A1-201ENST00000320755 SMIM35A0A1B0GVV1 85 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 TM7SF2O76062 418 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 SCNN1AP37088 669 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 RPL34P49207 117 aaKnown RBP17.83■□□□□ 0.44
COL9A1-201ENST00000320755 CACNA2D1P54289 1103 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 LRRC36Q1X8D7 754 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 PAN2Q504Q3 1202 aaKnown RBP17.83■□□□□ 0.44
COL9A1-201ENST00000320755 TMEM154Q6P9G4 183 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 MAVSQ7Z434 540 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 PLEKHH3Q7Z736 793 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 MS4A4AQ96JQ5 239 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 DNAI2Q9GZS0 605 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 TMEM30AQ9NV96 361 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 GTF2IRD1Q9UHL9 959 aa17.83■□□□□ 0.44
COL9A1-201ENST00000320755 SIN3BO75182 1162 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 PDE5AO76074 875 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 PRKCGP05129 697 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 GCKP35557 465 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 KLC1Q07866 573 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 DPYSQ14117 519 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 FSTL4Q6MZW2 842 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 TLK2Q86UE8 772 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 ACVR1CQ8NER5 493 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms