RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ANO7Q6IWH7 933 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 R3HCC1LQ7Z5L2 792 aaKnown RBP4.44□□□□□ -1.7
SMCO3-201ENST00000316048 WDR63Q8IWG1 891 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TBC1D3Q8IZP1 549 aaPredicted RBP4.44□□□□□ -1.7
SMCO3-201ENST00000316048 LNX2Q8N448 690 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 RSPRY1Q96DX4 576 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 FBXL20Q96IG2 436 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 FAR2Q96K12 515 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 C8orf49Q96NF6 230 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 LENG8Q96PV6 779 aaPredicted RBP4.44□□□□□ -1.7
SMCO3-201ENST00000316048 TESQ9UGI8 421 aaKnown RBP4.44□□□□□ -1.7
SMCO3-201ENST00000316048 GABRQQ9UN88 632 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 CAMK2AQ9UQM7 478 aa4.44□□□□□ -1.7
SMCO3-201ENST00000316048 LAS1LQ9Y4W2 734 aaKnown RBP4.44□□□□□ -1.7
SMCO3-201ENST00000316048 CPSF1Q10570 1443 aaKnown RBP4.44□□□□□ -1.7
SMCO3-201ENST00000316048 EDC4Q6P2E9 1401 aaKnown RBP4.44□□□□□ -1.7
SMCO3-201ENST00000316048 PIK3R4Q99570 1358 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 MAPK8IP3Q9UPT6 1336 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 MBD3L5A6NJ08 208 aaPredicted RBP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 ENGP17813 658 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 ADRA1DP25100 572 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 GALNSP34059 522 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 MCM2P49736 904 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 DNASE1L3Q13609 305 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 NFIL3Q16649 462 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 NRN1LQ496H8 165 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 SPDYAQ5MJ70 313 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 L1TD1Q5T7N2 865 aaKnown RBP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 ZNF618Q5T7W0 954 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 ACSM6Q6P461 480 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 PTGR2Q8N8N7 351 aaPredicted RBP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 USP38Q8NB14 1042 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 LSM14AQ8ND56 463 aaKnown RBP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 APOPT1Q96IL0 206 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 VPS50Q96JG6 964 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 Q96MF0 132 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 LBHD1Q9BQE6 289 aaPredicted RBP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 MLST8Q9BVC4 326 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 SLC25A18Q9H1K4 315 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 MROH8Q9H579 483 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 CDCP1Q9H5V8 836 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 KLC4Q9NSK0 619 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 TBCCD1Q9NVR7 557 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 BCCIPQ9P287 314 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 CCNL1Q9UK58 526 aaPredicted RBP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 DIP2AQ14689 1571 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 A0A087X0M5 115 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 A0A1B0GX30 115 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 FSD2A1L4K1 749 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 DHX16O60231 1041 aaKnown RBP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 ZFXP17010 805 aaPredicted RBP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 MAPK4P31152 587 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 RGS2P41220 211 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 PNPLA4P41247 253 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 DGCR2P98153 550 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 CBWD5Q5RIA9 395 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 Q6ZWC4 215 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 ANKRD44Q8N8A2 993 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 OVCA2Q8WZ82 227 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 ELP4Q96EB1 424 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 C7orf26Q96N11 449 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 PIGSQ96S52 555 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 MPHOSPH8Q99549 860 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 AIFM2Q9BRQ8 373 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 CTDSP1Q9GZU7 261 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 USP29Q9HBJ7 922 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 PDE11AQ9HCR9 933 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 TRIM36Q9NQ86 728 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 KCTD5Q9NXV2 234 aa4.43□□□□□ -1.7
SMCO3-201ENST00000316048 COPG1Q9Y678 874 aaKnown RBP4.43□□□□□ -1.7
SMCO3-201ENST00000316048 PNPLA6Q8IY17 1366 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 ACEP12821 1306 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 CCDC196A0A1B0GTZ2 297 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 H3BNC9 293 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 SUV39H1O43463 412 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 TSPAN3O60637 253 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 TMIGD3P0DMS9 266 aaPredicted RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 POLD2P49005 469 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 DGKQP52824 942 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 TPTEP56180 551 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 NXPH1P58417 271 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 RPP30P78346 268 aaKnown RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 CDK18Q07002 472 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 LMAN2Q12907 356 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 GAB1Q13480 694 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 ERV3-1Q14264 604 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 TBRG1Q3YBR2 411 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 FAM69AQ5T7M9 428 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 FAM205BPQ63HN1 556 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 ITPRIPL1Q6GPH6 555 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 LAIR1Q6GTX8 287 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 C4orf50Q6ZRC1 276 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 PTCHD4Q6ZW05 846 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 SLC44A3Q8N4M1 653 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 KCNJ9Q92806 393 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 HDHD5Q9BXW7 423 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 SLC2A4RGQ9NR83 387 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 MGAT4CQ9UBM8 478 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 POLKQ9UBT6 870 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms