RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ABL2P42684 1182 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 CYP51A1Q16850 503 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 PRPF39Q86UA1 669 aaKnown RBP13.77□□□□□ -0.2
RFFL-201ENST00000315249 KCNMB4Q86W47 210 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 NPAS4Q8IUM7 802 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 OSCP1Q8WVF1 389 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 OR8D1Q8WZ84 308 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 ZBTB14O43829 449 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 GLRA3O75311 464 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 NUDT14O95848 222 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 ACLYP53396 1101 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 TAF10Q12962 218 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 CCNI2Q6ZMN8 369 aaPredicted RBP13.77□□□□□ -0.2
RFFL-201ENST00000315249 RIBC1Q8N443 379 aaPredicted RBP13.77□□□□□ -0.2
RFFL-201ENST00000315249 MTFMTQ96DP5 389 aaKnown RBP13.77□□□□□ -0.2
RFFL-201ENST00000315249 CLIP3Q96DZ5 547 aa13.77□□□□□ -0.2
RFFL-201ENST00000315249 RAD51BO15315 384 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 SKOR1P84550 965 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 ZNF470Q6ECI4 717 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 DIS3LQ8TF46 1054 aaKnown RBP13.77□□□□□ -0.21
RFFL-201ENST00000315249 USP6NLQ92738 828 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 RIPOR3Q96MK2 946 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 ADNPQ9H2P0 1102 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 TAS2R13Q9NYV9 303 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 FGF10O15520 208 aaPredicted RBP13.77□□□□□ -0.21
RFFL-201ENST00000315249 CD151P48509 253 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 TBCBQ99426 244 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 ASB8Q9H765 288 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 ZCCHC17Q9NP64 241 aaKnown RBP13.77□□□□□ -0.21
RFFL-201ENST00000315249 SRRDQ9UH36 339 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 ARL5CA6NH57 179 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 TRPC5OSA6NMA1 111 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 SERPINI2O75830 405 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 CTPS1P17812 591 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 PANX3Q96QZ0 392 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 DUSP9Q99956 384 aaKnown RBP13.77□□□□□ -0.21
RFFL-201ENST00000315249 PTPRHQ9HD43 1115 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 ZNF112Q9UJU3 913 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 ACOT9Q9Y305 439 aa13.77□□□□□ -0.21
RFFL-201ENST00000315249 A0A1W2PQH9 124 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 PTPRJQ12913 1337 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 CCNG2Q16589 344 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 INPP4AQ96PE3 977 aaPredicted RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 THTPAQ9BU02 230 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 EIF2AQ9BY44 585 aaKnown RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.76□□□□□ -0.21
RFFL-201ENST00000315249 SAE1Q9UBE0 346 aaPredicted RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 ZMYM5Q9UJ78 669 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 MAGEB16A2A368 324 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 FGF19O95750 216 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 HSPA14Q0VDF9 509 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 CASP10Q92851 521 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 GULP1Q9UBP9 304 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 GPM6BQ13491 265 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 NR6A1Q15406 480 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 MFSD7Q6UXD7 560 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 SMAD5Q99717 465 aaKnown RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 EXO5Q9H790 373 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 CATSPERZQ9NTU4 200 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 WHRNQ9P202 907 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 DEC1Q9P2X7 70 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 RPL17P18621 184 aaKnown RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 RTP1P59025 263 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 CYP20A1Q6UW02 462 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 MAGEC3Q8TD91 643 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 ADAM28Q9UKQ2 775 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 TPBGLP0DKB5 382 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 LBX1P52954 281 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 COLGALT2Q8IYK4 626 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 NOA1Q8NC60 698 aaKnown RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 ZNF555Q8NEP9 628 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 ELMO1Q92556 727 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 C10orf88Q9H8K7 445 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 AHSPQ9NZD4 102 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 PPP1R11O60927 126 aaPredicted RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 MT-CO1P00395 513 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 TRPC1P48995 793 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 CLK2P49760 499 aaKnown RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 MAXP61244 160 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 SGSM3Q96HU1 749 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 HSFY1Q96LI6 401 aa13.76□□□□□ -0.21
RFFL-201ENST00000315249 ROPN1BQ9BZX4 212 aaPredicted RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 ROPN1Q9HAT0 212 aaPredicted RBP13.76□□□□□ -0.21
RFFL-201ENST00000315249 SPATA31C1P0DKV0 1188 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 SERPINH1P50454 418 aaKnown RBP13.75□□□□□ -0.21
RFFL-201ENST00000315249 SETD3Q86TU7 594 aaPredicted RBP13.75□□□□□ -0.21
RFFL-201ENST00000315249 FAM35AQ86V20 835 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 CMTM5Q96DZ9 223 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 NDEL1Q9GZM8 345 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 GMIPQ9P107 970 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 SERPINB5P36952 375 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 C16orf89Q6UX73 402 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 NPNTQ6UXI9 565 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 NAALADL1Q9UQQ1 740 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 TBC1D4O60343 1298 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 PIRTP0C851 137 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 PYGMP11217 842 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 LRRC36Q1X8D7 754 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 ARID3BQ8IVW6 561 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms