RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 FAM183BPQ6ZVS7 135 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 DSG4Q86SJ6 1040 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 SLC47A2Q86VL8 602 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 DHX40Q8IX18 779 aaKnown RBP13.1□□□□□ -0.31
CKS2-201ENST00000314355 FAM71AQ8IYT1 594 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 CCAR2Q8N163 923 aaKnown RBP13.1□□□□□ -0.31
CKS2-201ENST00000314355 WDTC1Q8N5D0 677 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 WFDC5Q8TCV5 224 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
CKS2-201ENST00000314355 SLC2A13Q96QE2 648 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 FSCN3Q9NQT6 498 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 DNAAF2Q9NVR5 837 aaKnown RBP13.1□□□□□ -0.31
CKS2-201ENST00000314355 TPX2Q9ULW0 747 aaKnown RBP13.1□□□□□ -0.31
CKS2-201ENST00000314355 FRYLO94915 3013 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 PI4KAP42356 2102 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 DMXL1Q9Y485 3027 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 SIN3BO75182 1162 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 CLDN11O75508 207 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 DAB1O75553 588 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 RNASEH2AO75792 299 aaKnown RBP13.09□□□□□ -0.31
CKS2-201ENST00000314355 CYP11B1P15538 503 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 ZNF18P17022 549 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 CDK11BP21127 795 aaKnown RBP13.09□□□□□ -0.31
CKS2-201ENST00000314355 ACSL1P33121 698 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 C21orf59P57076 290 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 APBA1Q02410 837 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 DEUP1Q05D60 604 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 GRIK2Q13002 908 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 TAF5Q15542 800 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 SLC45A4Q5BKX6 768 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 TCP11X2Q5H9J9 407 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 FSCBQ5H9T9 825 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 BRMS1LQ5PSV4 323 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 FAM46CQ5VWP2 391 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 SLC26A9Q7LBE3 791 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 ZNF677Q86XU0 584 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 ZNF397Q8NF99 534 aaPredicted RBP13.09□□□□□ -0.31
CKS2-201ENST00000314355 ENOX1Q8TC92 643 aaKnown RBP13.09□□□□□ -0.31
CKS2-201ENST00000314355 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
CKS2-201ENST00000314355 CCDC114Q96M63 670 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 PRICKLE1Q96MT3 831 aaPredicted RBP13.09□□□□□ -0.31
CKS2-201ENST00000314355 SPAG5Q96R06 1193 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 STK33Q9BYT3 514 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 RSPH9Q9H1X1 276 aaPredicted RBP13.09□□□□□ -0.31
CKS2-201ENST00000314355 GAREM1Q9H706 876 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 PLXND1Q9Y4D7 1925 aa13.09□□□□□ -0.31
CKS2-201ENST00000314355 CEP192Q8TEP8 1941 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 DFNA5O60443 496 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 ADH1BP00325 375 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 IL1BP01584 269 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 IGLV3-25P01717 112 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 UCHL3P15374 230 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 PDGFRAP16234 1089 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 C5AR1P21730 350 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 CD27P26842 260 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 SLC8A1P32418 973 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 SULT1E1P49888 294 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 CDH4P55283 916 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 AUHQ13825 339 aaKnown RBP13.08□□□□□ -0.32
CKS2-201ENST00000314355 ARID5BQ14865 1188 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 SYCP1Q15431 976 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 TRIP6Q15654 476 aaKnown RBP13.08□□□□□ -0.32
CKS2-201ENST00000314355 ZNF423Q2M1K9 1284 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 FAM102AQ5T9C2 384 aaPredicted RBP13.08□□□□□ -0.32
CKS2-201ENST00000314355 FBXL22Q6P050 247 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 MMS22LQ6ZRQ5 1243 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
CKS2-201ENST00000314355 RPL10LQ96L21 214 aaKnown RBP13.08□□□□□ -0.32
CKS2-201ENST00000314355 MUC3BQ9H195 1237 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 VPS16Q9H269 839 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 PABPC3Q9H361 631 aaKnown RBP13.08□□□□□ -0.32
CKS2-201ENST00000314355 C6orf106Q9H6K1 298 aaPredicted RBP13.08□□□□□ -0.32
CKS2-201ENST00000314355 SIX2Q9NPC8 291 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 SAMSN1Q9NSI8 373 aaKnown RBP13.08□□□□□ -0.32
CKS2-201ENST00000314355 XPO7Q9UIA9 1087 aaKnown RBP13.08□□□□□ -0.32
CKS2-201ENST00000314355 VPS28Q9UK41 221 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 INTS6Q9UL03 887 aaKnown RBP13.08□□□□□ -0.32
CKS2-201ENST00000314355 VANGL2Q9ULK5 521 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 DAAM1Q9Y4D1 1078 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 NCOR2Q9Y618 2525 aa13.08□□□□□ -0.32
CKS2-201ENST00000314355 A0A1W2PP55 124 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 TTC34A8MYJ7 566 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 LSM8O95777 96 aaKnown RBP13.07□□□□□ -0.32
CKS2-201ENST00000314355 ERBB2P04626 1255 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 ZNF883P0CG24 379 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 SCNN1AP37088 669 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 CSNK1EP49674 416 aaKnown RBP13.07□□□□□ -0.32
CKS2-201ENST00000314355 PLK1P53350 603 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 KCNMA1Q12791 1236 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 ELAVL3Q14576 367 aaKnown RBP13.07□□□□□ -0.32
CKS2-201ENST00000314355 CST6Q15828 149 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 HLA-BQ31612 363 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 MIIPQ5JXC2 388 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 TAF3Q5VWG9 929 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 KIAA0895LQ68EN5 471 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 OLFML1Q6UWY5 402 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 PIP4P1Q86T03 277 aa13.07□□□□□ -0.32
CKS2-201ENST00000314355 APCDD1Q8J025 514 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms