RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SLC35F5Q8WV83 523 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 CD101Q93033 1021 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 ZBTB24O43167 697 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 MPOP05164 745 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 MFSD5Q6N075 450 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 VSTM1Q6UX27 236 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 HERPUD2Q9BSE4 406 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 SENP6Q9GZR1 1112 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 TAGLN3Q9UI15 199 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 CYTH4Q9UIA0 394 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 NCF1BA6NI72 391 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 NCF1CA8MVU1 366 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 KIF3CO14782 793 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 TRIM13O60858 407 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 DNAJC6O75061 913 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 NCF1P14598 390 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 TSHRP16473 764 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 ZNF470Q6ECI4 717 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 MRPL1Q9BYD6 325 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 FBXO44Q9H4M3 255 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 ARHGEF4Q9NR80 690 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 LYPLA1O75608 230 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 PIRTP0C851 137 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 NUDT2P50583 147 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 RCN1Q15293 331 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 MAPRE2Q15555 327 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 PCID2Q5JVF3 399 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 AGAP9Q5VTM2 703 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 SUGP1Q8IWZ8 645 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 NAT8LQ8N9F0 302 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 DDI1Q8WTU0 396 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 DDX50Q9BQ39 737 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 A0A1W2PQH9 124 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 OTOP3Q7RTS5 596 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 LCA5Q86VQ0 697 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 STK32AQ8WU08 396 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 SPOCK2Q92563 424 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 CATSPER2Q96P56 530 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 CPNE1Q99829 537 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 OMDQ99983 421 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 RNF208Q9H0X6 261 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 IL1RL2Q9HB29 575 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 BAG5Q9UL15 447 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 C2orf81A6NN90 581 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 F8W8V4 182 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 SLC1A6P48664 564 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 CRHR2Q13324 411 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 UBAP2Q5T6F2 1119 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 TMC7Q7Z402 723 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 TRIML2Q8N7C3 387 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 PIP4K2CQ8TBX8 421 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 FCRL2Q96LA5 508 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 ZBTB18Q99592 522 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 CAB39LQ9H9S4 337 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 FBXO6Q9NRD1 293 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 FAM95CA0A1B0GW59 222 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 DDHD2O94830 711 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 SERPINF2P08697 491 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 NAGLUP54802 743 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 GHRHRQ02643 423 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 ELAVL2Q12926 359 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 CDH18Q13634 790 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 HFE2Q6ZVN8 426 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 RFWD2Q8NHY2 731 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 NCLNQ969V3 563 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 TUBGCP3Q96CW5 907 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 UBE2OQ9C0C9 1292 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 ZYG11BQ9C0D3 744 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 ACSS2Q9NR19 701 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 YJEFN3A6XGL0 299 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 E7ENQ6 273 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 CYP3A5P20815 502 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 RPL9P32969 192 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 ELF3P78545 371 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 CTBP1Q13363 440 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 SNX10Q9Y5X0 201 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 SEPT4O43236 478 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 LDLRAD1Q5T700 205 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TMEM110Q86TL2 294 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PHF21BQ96EK2 531 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 MARCH2Q9P0N8 246 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SH3BP1Q9Y3L3 701 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 HEATR9A2RTY3 570 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PAGE1O75459 146 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SLC25A11Q02978 314 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 BTG3Q14201 252 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 RNF148Q8N7C7 305 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 NMRAL1Q9HBL8 299 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 ANLNQ9NQW6 1124 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 DTLQ9NZJ0 730 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TRMT6Q9UJA5 497 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PACSIN3Q9UKS6 424 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 F2P00734 622 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 ATXN8OSP0DMR3 200 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 GRK4P32298 578 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 POLD3Q15054 466 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TIGD5Q53EQ6 642 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 KRT80Q6KB66 452 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 KCTD4Q8WVF5 259 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CHRAC1Q9NRG0 131 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms