RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CCNCP24863 283 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 ELK3P41970 407 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 LMAN1P49257 510 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 VEPH1Q14D04 833 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 TEX44Q53QW1 395 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 KLHDC10Q6PID8 442 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 LRRC49Q8IUZ0 686 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 TCEAL8Q8IYN2 117 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 RTL3Q8N8U3 475 aaKnown RBP17.17■□□□□ 0.34
CLCF1-201ENST00000312438 LRRC39Q96DD0 335 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 ZBED2Q9BTP6 218 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 CAPS2Q9BXY5 557 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 EIF2B3Q9NR50 452 aaKnown RBP17.17■□□□□ 0.34
CLCF1-201ENST00000312438 TRPM5Q9NZQ8 1165 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 KLHL8Q9P2G9 620 aaPredicted RBP17.17■□□□□ 0.34
CLCF1-201ENST00000312438 YIPF1Q9Y548 306 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 LTBP2Q14767 1821 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 PRRG1O14668 218 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 AVILO75366 819 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 DNAJB2P25686 324 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 PPP3CCP48454 512 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 ATP1A2P50993 1020 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 PPP2R2AP63151 447 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 IFI35P80217 286 aaPredicted RBP17.17■□□□□ 0.34
CLCF1-201ENST00000312438 HECTD3Q5T447 861 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 NUGGCQ68CJ6 796 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 ZNF683Q8IZ20 524 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 RIBC1Q8N443 379 aaPredicted RBP17.17■□□□□ 0.34
CLCF1-201ENST00000312438 TRMT2BQ96GJ1 504 aaKnown RBP17.17■□□□□ 0.34
CLCF1-201ENST00000312438 WDR83Q9BRX9 315 aaKnown RBP17.17■□□□□ 0.34
CLCF1-201ENST00000312438 ZYG11BQ9C0D3 744 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 RXFP1Q9HBX9 757 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 XAB2Q9HCS7 855 aaKnown RBP17.17■□□□□ 0.34
CLCF1-201ENST00000312438 PCDH10Q9P2E7 1040 aa17.17■□□□□ 0.34
CLCF1-201ENST00000312438 CLUHO75153 1309 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 EXOC1LA0A1B0GW35 172 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 HMBSP08397 361 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 MLNP12872 115 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 RHOQP17081 205 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 SSTR1P30872 391 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 MTM1Q13496 603 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 CAPN12Q6ZSI9 719 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 ARHGAP12Q8IWW6 846 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 AUTS2Q8WXX7 1259 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 CLP1Q92989 425 aaKnown RBP17.16■□□□□ 0.34
CLCF1-201ENST00000312438 CEP41Q9BYV8 373 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 SLC39A8Q9C0K1 460 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 NACA2Q9H009 215 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 MPP6Q9NZW5 540 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.16■□□□□ 0.34
CLCF1-201ENST00000312438 FETUBQ9UGM5 382 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 VANGL2Q9ULK5 521 aa17.16■□□□□ 0.34
CLCF1-201ENST00000312438 IGLV3-10A0A075B6K4 115 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 DRGXA6NNA5 263 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 DFFAO00273 331 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 TEX28O15482 410 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 SPAG6O75602 509 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 CTSAP10619 480 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 MAGEA3P43357 314 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 EPHB3P54753 998 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 TMEM240Q5SV17 173 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 AFMIDQ63HM1 303 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 ITPRIPL1Q6GPH6 555 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 TAOK1Q7L7X3 1001 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 NLRP14Q86W24 1093 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 TDRPQ86YL5 185 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 IGDCC3Q8IVU1 814 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 DEPDC1BQ8WUY9 529 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 ZBP1Q9H171 429 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 LGALS13Q9UHV8 139 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 RABGEF1Q9UJ41 708 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 CHMP2BQ9UQN3 213 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 PLXNA3P51805 1871 aa17.15■□□□□ 0.34
CLCF1-201ENST00000312438 ZBTB24O43167 697 aaPredicted RBP17.14■□□□□ 0.34
CLCF1-201ENST00000312438 LINC00271P0C7V0 271 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 PSMB4P28070 264 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 MMP13P45452 471 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 TWF1Q12792 350 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 RASA2Q15283 850 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 FBXL22Q6P050 247 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 LRRC8BQ6P9F7 803 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 PSRC1Q6PGN9 363 aaPredicted RBP17.14■□□□□ 0.34
CLCF1-201ENST00000312438 ZNF534Q76KX8 674 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 DNAJB7Q7Z6W7 309 aaPredicted RBP17.14■□□□□ 0.34
CLCF1-201ENST00000312438 UMODL1-AS1Q8N2C9 162 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 ATPAF2Q8N5M1 289 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 PDCD7Q8N8D1 485 aaKnown RBP17.14■□□□□ 0.34
CLCF1-201ENST00000312438 ZSCAN18Q8TBC5 510 aaPredicted RBP17.14■□□□□ 0.34
CLCF1-201ENST00000312438 DPF3Q92784 378 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 TEKT5Q96M29 485 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 PRMT1Q99873 361 aaKnown RBP17.14■□□□□ 0.34
CLCF1-201ENST00000312438 CNOT10Q9H9A5 744 aaKnown RBP17.14■□□□□ 0.34
CLCF1-201ENST00000312438 NDFIP2Q9NV92 336 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 TMEM248Q9NWD8 314 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 UXTQ9UBK9 157 aaPredicted RBP17.14■□□□□ 0.34
CLCF1-201ENST00000312438 SLC24A2Q9UI40 661 aa17.14■□□□□ 0.34
CLCF1-201ENST00000312438 MATN3O15232 486 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 SHOX2O60902 331 aaPredicted RBP17.14■□□□□ 0.33
CLCF1-201ENST00000312438 JCHAINP01591 159 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 GSTA2P09210 222 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms