RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 HAUS8Q9BT25 410 aa15.02■□□□□ -0
COL6A2-202ENST00000310645 DOLKQ9UPQ8 538 aa15.02■□□□□ -0
COL6A2-202ENST00000310645 RNF11Q9Y3C5 154 aa15.02■□□□□ -0
COL6A2-202ENST00000310645 FIS1Q9Y3D6 152 aa15.02■□□□□ -0
COL6A2-202ENST00000310645 LTBP1Q14766 1721 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 OGTO15294 1046 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 FAM163BP0C2L3 166 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 TFE3P19532 575 aaPredicted RBP15.02□□□□□ -0.01
COL6A2-202ENST00000310645 FUT4P22083 530 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 ABCD1P33897 745 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 GPD2P43304 727 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 CCDC14Q49A88 953 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 ZFP1Q6P2D0 407 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 POTEHQ6S545 545 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 LRRC71Q8N4P6 559 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 RNF149Q8NC42 400 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 MRPL4Q9BYD3 311 aaKnown RBP15.02□□□□□ -0.01
COL6A2-202ENST00000310645 PCDHAC1Q9H158 963 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 FAM49BQ9NUQ9 324 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 PRPF19Q9UMS4 504 aaKnown RBP15.02□□□□□ -0.01
COL6A2-202ENST00000310645 FZD1Q9UP38 647 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 SNX13Q9Y5W8 968 aa15.02□□□□□ -0.01
COL6A2-202ENST00000310645 CCDC78A2IDD5 438 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 YDJCA8MPS7 323 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 COQ9O75208 318 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 USP12O75317 370 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 STAMBPO95630 424 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 CXCL8P10145 99 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 MAGEA3P43357 314 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 PLOD1Q02809 727 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 BOLA3Q53S33 107 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 PIGGQ5H8A4 983 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 SLC9A4Q6AI14 798 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 SCUBE3Q8IX30 993 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 C12orf29Q8N999 325 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 FNDC8Q8TC99 324 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 AGAP3Q96P47 875 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 GATA5Q9BWX5 397 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 UNKQ9C0B0 810 aaKnown RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 SYBUQ9NX95 663 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 BCAP29Q9UHQ4 241 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 WDR46O15213 610 aaKnown RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 MMP10P09238 476 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 HOXC6P09630 235 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 GLRBP48167 497 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 NAA20P61599 178 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 PDK2Q15119 407 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 SNRNP48Q6IEG0 339 aaKnown RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 CYP2R1Q6VVX0 501 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 CLVS1Q8IUQ0 354 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 ZNF513Q8N8E2 541 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 NSUN6Q8TEA1 469 aaKnown RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 LRTOMTQ8WZ04 291 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 PPWD1Q96BP3 646 aaKnown RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 RTP4Q96DX8 246 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 TMEM176AQ96HP8 235 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 ILKAPQ9H0C8 392 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 RPAP3Q9H6T3 665 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 ITGB3P05106 788 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 ALOX15P16050 662 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 PRDX6P30041 224 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 SDC4P31431 198 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 MGAT5BQ3V5L5 792 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 ANKDD1AQ495B1 522 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 COLGALT1Q8NBJ5 622 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 CIB1Q99828 191 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 GCOM2Q9BZD3 368 aaPredicted RBP15.01□□□□□ -0.01
COL6A2-202ENST00000310645 SH3GLB1Q9Y371 365 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 PCDHGA4Q9Y5G9 962 aa15.01□□□□□ -0.01
COL6A2-202ENST00000310645 GOLGA8TH3BQL2 631 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 TRIM13O60858 407 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 SEC24DO94855 1032 aaPredicted RBP15□□□□□ -0.01
COL6A2-202ENST00000310645 PRKCBP05771 671 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 NDST2P52849 883 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 SULT2A1Q06520 285 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 NIPAL4Q0D2K0 466 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 STXBP5Q5T5C0 1151 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 STRA8Q7Z7C7 330 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 ERI1Q8IV48 349 aaKnown RBP15□□□□□ -0.01
COL6A2-202ENST00000310645 CPNE9Q8IYJ1 553 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 GIPC3Q8TF64 312 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 ACO2Q99798 780 aaKnown RBP15□□□□□ -0.01
COL6A2-202ENST00000310645 A0A096LPK6 155 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 INO80B-WBP1J3KQ70 363 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 GJB1P08034 283 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 GARSP41250 739 aaKnown RBP15□□□□□ -0.01
COL6A2-202ENST00000310645 CNTN2Q02246 1040 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 SEL1L3Q68CR1 1132 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 TICAM1Q8IUC6 712 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 CCNYQ8ND76 341 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 AGAP2Q99490 1192 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 B3GNT5Q9BYG0 378 aa15□□□□□ -0.01
COL6A2-202ENST00000310645 INO80BQ9C086 356 aaPredicted RBP15□□□□□ -0.01
COL6A2-202ENST00000310645 PIGNO95427 931 aa14.99□□□□□ -0.01
COL6A2-202ENST00000310645 TPSB2P20231 275 aa14.99□□□□□ -0.01
COL6A2-202ENST00000310645 GLDCP23378 1020 aa14.99□□□□□ -0.01
COL6A2-202ENST00000310645 CHRNA5P30532 468 aa14.99□□□□□ -0.01
COL6A2-202ENST00000310645 HSPA13P48723 471 aa14.99□□□□□ -0.01
COL6A2-202ENST00000310645 FKBP1AP62942 108 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms