RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 PEX10O60683 326 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 CSDE1O75534 798 aaKnown RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 FGBP02675 491 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 NUDT17P0C025 328 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 CCDC159P0C7I6 412 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 CCDC130P13994 396 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 TPSB2P20231 275 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 EPHB2P29323 1055 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 HPDP32754 393 aaPredicted RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 WASHC5Q12768 1159 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 CYLC2Q14093 348 aaPredicted RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 GRM3Q14832 879 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 TPSAB1Q15661 275 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 DPYSL2Q16555 572 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 SLC39A12Q504Y0 691 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 HECTD3Q5T447 861 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 FUT10Q6P4F1 479 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 CHSY1Q86X52 802 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 APLFQ8IW19 511 aaPredicted RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 SMG8Q8ND04 991 aaKnown RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 MCUQ8NE86 351 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 CMASQ8NFW8 434 aaPredicted RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 ACTL9Q8TC94 416 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 PGM2Q96G03 612 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 PRM3Q9NNZ6 103 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 FLRT1Q9NZU1 646 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 HACD3Q9P035 362 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 ATXN10Q9UBB4 475 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 BCAP29Q9UHQ4 241 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 TRPM7Q96QT4 1865 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 PLXNB2O15031 1838 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 HNRNPCL1O60812 293 aaKnown RBP6.15□□□□□ -1.43
SEC22A-201ENST00000309934 SUN1O94901 812 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 TAC1P20366 129 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 MAGEA10P43363 369 aaPredicted RBP6.15□□□□□ -1.43
SEC22A-201ENST00000309934 NDUFV1P49821 464 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 PEX5P50542 639 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 DAOAP59103 153 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 UBE3AQ05086 875 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 MGAT3Q09327 533 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 DSC3Q14574 896 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 NOMO1Q15155 1222 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 UAP1Q16222 522 aaPredicted RBP6.15□□□□□ -1.43
SEC22A-201ENST00000309934 UPP1Q16831 310 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 AARS2Q5JTZ9 985 aaKnown RBP6.15□□□□□ -1.43
SEC22A-201ENST00000309934 UBXN11Q5T124 520 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 MFSD7Q6UXD7 560 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 TEX9Q8N6V9 391 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 HTR3CQ8WXA8 447 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 STMN2Q93045 179 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 BTN2A3PQ96KV6 586 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 GDAP1L1Q96MZ0 367 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 FUT8Q9BYC5 575 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 RAB6BQ9NRW1 208 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 GIMAP4Q9NUV9 329 aa6.15□□□□□ -1.43
SEC22A-201ENST00000309934 A0A0A0MRY4 1105 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 GIPC1O14908 333 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 OAZ2O95190 189 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 ZWINTO95229 277 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 C1RP00736 705 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 FESP07332 822 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 SERPINB3P29508 390 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 SERPINB4P48594 390 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 NDST2P52849 883 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 PTPROQ16827 1216 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 RALGPS1Q5JS13 557 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 SPANXN3Q5MJ09 141 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 C6orf183Q5T699 404 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 TMEM154Q6P9G4 183 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 NCCRP1Q6ZVX7 275 aaPredicted RBP6.14□□□□□ -1.43
SEC22A-201ENST00000309934 RIN2Q8WYP3 895 aaPredicted RBP6.14□□□□□ -1.43
SEC22A-201ENST00000309934 SPATA13Q96N96 652 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 CPXM1Q96SM3 734 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 HERC2P3Q9BVR0 1158 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 SLC40A1Q9NP59 571 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 ENTPD7Q9NQZ7 604 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 DLGAP2Q9P1A6 1054 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 KLHL14Q9P2G3 628 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 ZMAT5Q9UDW3 170 aaKnown RBP6.14□□□□□ -1.43
SEC22A-201ENST00000309934 SCML2Q9UQR0 700 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 TMED5Q9Y3A6 229 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 TTLL13PA6NNM8 815 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 PI4K2BG5E9Z4 385 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 MAP2K7O14733 419 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 IRAK2O43187 625 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 MAP3K7O43318 606 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 GUCY1B2O75343 617 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 ATP5HO75947 161 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 SPRP35270 261 aaPredicted RBP6.14□□□□□ -1.43
SEC22A-201ENST00000309934 CHKAP35790 457 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 CLCNKBP51801 687 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 FAM189BP81408 668 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 ZNF200P98182 395 aaPredicted RBP6.14□□□□□ -1.43
SEC22A-201ENST00000309934 SF3A3Q12874 501 aaKnown RBP eCLIP6.14□□□□□ -1.43
SEC22A-201ENST00000309934 TRIP4Q15650 581 aaPredicted RBP6.14□□□□□ -1.43
SEC22A-201ENST00000309934 PARP15Q460N3 678 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 C1orf53Q5VUE5 145 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 KCTD16Q68DU8 428 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 RETSATQ6NUM9 610 aa6.14□□□□□ -1.43
SEC22A-201ENST00000309934 KDM7AQ6ZMT4 941 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms