RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SGSHP51688 502 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 SULT2A1Q06520 285 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 ZFYVE27Q5T4F4 411 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 KIAA0907Q7Z7F0 614 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 C12orf40Q86WS4 652 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 CFAP52Q8N1V2 620 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 LZTR1Q8N653 840 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 RTL3Q8N8U3 475 aaKnown RBP18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 KCTD6Q8NC69 237 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 FAM71BQ8TC56 605 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 HSPH1Q92598 858 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 ZNF670Q9BS34 389 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 TMPRSS4Q9NRS4 437 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 SALL4Q9UJQ4 1053 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 GGA2Q9UJY4 613 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 STARD13Q9Y3M8 1113 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 DUSP10Q9Y6W6 482 aa18.42■□□□□ 0.54
SSSCA1-201ENST00000309328 ILVBLA1L0T0 632 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 CCDC66A2RUB6 948 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 SHISA7A6NL88 538 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 MIF4GDA9UHW6 222 aaKnown RBP18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 ATG13O75143 517 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 ASLP04424 464 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 ATP5BP06576 529 aaKnown RBP18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 AOC1P19801 751 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 TARSP26639 723 aaKnown RBP18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 HLA-FP30511 346 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 OR1E1P30953 314 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 SLC6A11P48066 632 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 MRPS21P82921 87 aaKnown RBP18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 SMTNL2Q2TAL5 461 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 PPP6R3Q5H9R7 873 aaPredicted RBP18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 KCNT1Q5JUK3 1230 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 IER5LQ5T953 404 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 ASTLQ6HA08 431 aaPredicted RBP18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 RFX8Q6ZV50 586 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 NLRP14Q86W24 1093 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 ZNF687Q8N1G0 1237 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 LRRC57Q8N9N7 239 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 TRIM58Q8NG06 486 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 PBXIP1Q96AQ6 731 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 CLDN23Q96B33 292 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 KCNF1Q9H3M0 494 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 ABCB8Q9NUT2 735 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 GUCA1BQ9UMX6 200 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 NDRG2Q9UN36 371 aaKnown RBP18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 TFR2Q9UP52 801 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 TICRRQ7Z2Z1 1910 aa18.41■□□□□ 0.54
SSSCA1-201ENST00000309328 FAM72CH0Y354 149 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 GPR37L1O60883 481 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 RHOCP08134 193 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 CHRNB1P11230 501 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 MSNP26038 577 aaKnown RBP18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 SERPINB6P35237 376 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 GGCXP38435 758 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 PLK1P53350 603 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 CDH6P55285 790 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 YBEYP58557 167 aaPredicted RBP18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 TAS2R40P59535 323 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 KDSRQ06136 332 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 ALFQ53S48 1182 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 FAM72AQ5TYM5 149 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 FAM72DQ6L9T8 149 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 FSTL4Q6MZW2 842 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 PEX26Q7Z412 305 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 FAM72BQ86X60 149 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 PYROXD2Q8N2H3 581 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 FBXL6Q8N531 539 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 UBL4BQ8N7F7 174 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 FLCNQ8NFG4 579 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 ACDQ96AP0 544 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 MYEOVQ96EZ4 313 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 KCTD15Q96SI1 283 aaPredicted RBP18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 C2orf49Q9BVC5 232 aaPredicted RBP18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 GPATCH2LQ9NWQ4 482 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 MPP6Q9NZW5 540 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 AMFRQ9UKV5 643 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 NEU3Q9UQ49 428 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 SNX10Q9Y5X0 201 aa18.4■□□□□ 0.54
SSSCA1-201ENST00000309328 CUL9Q8IWT3 2517 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 GRID2IPA4D2P6 1211 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 PRR33A8MZF0 331 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 RAMP2O60895 175 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 CNTN5O94779 1100 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 TCF4P15884 667 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 POLR2EP19388 210 aaKnown RBP18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 CTNNA1P35221 906 aaKnown RBP18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 NUBP1P53384 320 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 LMAN2Q12907 356 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 CA9Q16790 459 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 PARP15Q460N3 678 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 DAB2IPQ5VWQ8 1189 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 CXorf57Q6NSI4 855 aaKnown RBP18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 MAMSTRQ6ZN01 415 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 CCDC105Q8IYK2 499 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 KATNAL2Q8IYT4 538 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 KDM1BQ8NB78 822 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 P2RY11Q96G91 374 aa18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 RBM41Q96IZ5 413 aaKnown RBP18.39■□□□□ 0.53
SSSCA1-201ENST00000309328 LMLNQ96KR4 655 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms