RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ALKBH5Q6P6C2 394 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 C6orf89Q6UWU4 347 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 TMC5Q6UXY8 1006 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 H2AFVQ71UI9 128 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 NIPA1Q7RTP0 329 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 KCNK18Q7Z418 384 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 CCDC91Q7Z6B0 441 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 NLRP14Q86W24 1093 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 CCDC50Q8IVM0 306 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 UBALD2Q8IYN6 164 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 VPS52Q8N1B4 723 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 LRRC43Q8N309 656 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 METTL13Q8N6R0 699 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 MAGEC3Q8TD91 643 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 RSAD2Q8WXG1 361 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 CASP10Q92851 521 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 GJA10Q969M2 543 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 CABS1Q96KC9 395 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 DRC1Q96MC2 740 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 FAM20AQ96MK3 541 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 KRT12Q99456 494 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 KLC2Q9H0B6 622 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 CNOT10Q9H9A5 744 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 NLRC4Q9NPP4 1024 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 ZNF302Q9NR11 478 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 GEMIN8Q9NWZ8 242 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 DNAJB4Q9UDY4 337 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 ARMCX3Q9UH62 379 aaPredicted RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 ADAMTS1Q9UHI8 967 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 NUDT5Q9UKK9 219 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 SF3B6Q9Y3B4 125 aaKnown RBP5.16□□□□□ -1.58
CKS1B-201ENST00000308987 NR2E1Q9Y466 385 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 NFS1Q9Y697 457 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 UBE4BO95155 1302 aa5.16□□□□□ -1.58
CKS1B-201ENST00000308987 ANK1P16157 1881 aa5.15□□□□□ -1.58
CKS1B-201ENST00000308987 PDCD11Q14690 1871 aaKnown RBP5.15□□□□□ -1.58
CKS1B-201ENST00000308987 KIF26AQ9ULI4 1882 aaPredicted RBP5.15□□□□□ -1.58
CKS1B-201ENST00000308987 BAHCC1Q9P281 2608 aa5.15□□□□□ -1.58
CKS1B-201ENST00000308987 GOLGA6L7A0A1B0GV03 622 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 MED19A0JLT2 244 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 GMNCA6NCL1 334 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 TMCO5BA8MYB1 307 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 F8W810 466 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 IPO5O00410 1097 aaKnown RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 KCNK3O14649 394 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 EIF3DO15371 548 aaKnown RBP eCLIP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 FGF10O15520 208 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 BUB1O43683 1085 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 FTCDO95954 541 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 GALTP07902 379 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 FAM153BP0C7A2 387 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 CTSAP10619 480 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 DARSP14868 501 aaKnown RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 IFNGR1P15260 489 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 UCHL3P15374 230 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 AOC1P19801 751 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 RPA1P27694 616 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 HNRNPH1P31943 449 aaKnown RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 CXCR5P32302 372 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 CIITAP33076 1130 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 STAT1P42224 750 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 MTHFRP42898 656 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 SLC11A1P49279 550 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 CLCN5P51795 746 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 SLC12A3P55017 1021 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 GSCP56915 257 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 JAM2P57087 298 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 POU4F1Q01851 419 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 POU5F1Q01860 360 aaKnown RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 ACTN3Q08043 901 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 PDCLQ13371 301 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 DHX34Q14147 1143 aaKnown RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 MYBPC2Q14324 1141 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 ICAM4Q14773 271 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 EPHA7Q15375 998 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 EXOC3L4Q17RC7 722 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 FAM153CQ494X1 144 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 LACTB2Q53H82 288 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 FAM160B1Q5W0V3 765 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 TAS1R1Q7RTX1 841 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF571Q7Z3V5 609 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 GPBP1Q86WP2 473 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF280BQ86YH2 543 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 SYT2Q8N9I0 419 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 TDRD5Q8NAT2 981 aaKnown RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 RNF169Q8NCN4 708 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 MYCBPAPQ8TBZ2 947 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF473Q8WTR7 871 aaKnown RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 TMEM174Q8WUU8 243 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 SCFD1Q8WVM8 642 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 CPA5Q8WXQ8 436 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 IFT81Q8WYA0 676 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 NKD2Q969F2 451 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 HPS3Q969F9 1004 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 RMDN1Q96DB5 314 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 HES6Q96HZ4 224 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 IGSF21Q96ID5 467 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 MS4A14Q96JA4 679 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 GDAP1L1Q96MZ0 367 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms