RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 MUC6Q6W4X9 2439 aa12.22□□□□□ -0.45
TRIM40-205ENST00000307859 CDH23Q9H251 3354 aa12.21□□□□□ -0.45
TRIM40-205ENST00000307859 SLC38A8A6NNN8 435 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 MTSS1O43312 755 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 BAIAP3O94812 1187 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 LAG3P18627 525 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 GCAP28676 217 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 ATP5DP30049 168 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 MDH1P40925 334 aaKnown RBP12.21□□□□□ -0.46
TRIM40-205ENST00000307859 GARSP41250 739 aaKnown RBP12.21□□□□□ -0.46
TRIM40-205ENST00000307859 GNGT1P63211 74 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 CDK16Q00536 496 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 DSG1Q02413 1049 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 ZNF33AQ06730 810 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 ADGRE1Q14246 886 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 FAM182AQ5T1J6 154 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 ZNF534Q76KX8 674 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 CAND1Q86VP6 1230 aaKnown RBP12.21□□□□□ -0.46
TRIM40-205ENST00000307859 AGGF1Q8N302 714 aaeCLIP12.21□□□□□ -0.46
TRIM40-205ENST00000307859 CCNYQ8ND76 341 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 TBC1D31Q96DN5 1066 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 CATSPERBQ9H7T0 1116 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 CNOT10Q9H9A5 744 aaKnown RBP12.21□□□□□ -0.46
TRIM40-205ENST00000307859 VPS37BQ9H9H4 285 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 IGSF9Q9P2J2 1179 aa12.21□□□□□ -0.46
TRIM40-205ENST00000307859 AFF4Q9UHB7 1163 aaKnown RBP12.21□□□□□ -0.46
TRIM40-205ENST00000307859 MTCL1Q9Y4B5 1905 aaKnown RBP12.21□□□□□ -0.46
TRIM40-205ENST00000307859 LAMA2P24043 3122 aaKnown RBP12.21□□□□□ -0.46
TRIM40-205ENST00000307859 EXOC1LA0A1B0GW35 172 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 SPAG6O75602 509 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 IGLV3-27P01718 113 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 RAG1P15918 1043 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 RPL17P18621 184 aaKnown RBP12.2□□□□□ -0.46
TRIM40-205ENST00000307859 SSTR1P30872 391 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 OR1D2P34982 312 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 PHBP35232 272 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 MMP13P45452 471 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 TUFMP49411 452 aaKnown RBP12.2□□□□□ -0.46
TRIM40-205ENST00000307859 IRAK1P51617 712 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 TBX4P57082 545 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 TRIP4Q15650 581 aaPredicted RBP12.2□□□□□ -0.46
TRIM40-205ENST00000307859 PARP6Q2NL67 630 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 RASIP1Q5U651 963 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 TPGS2Q68CL5 300 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 ZNF567Q8N184 647 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 TMEM199Q8N511 208 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 ZNF276Q8N554 614 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 COLGALT1Q8NBJ5 622 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 LRRC39Q96DD0 335 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 CLSTN3Q9BQT9 956 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 SIK2Q9H0K1 926 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 XAB2Q9HCS7 855 aaKnown RBP12.2□□□□□ -0.46
TRIM40-205ENST00000307859 CTNNAL1Q9UBT7 734 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 RABGEF1Q9UJ41 708 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 CHMP2BQ9UQN3 213 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 HS3ST4Q9Y661 456 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 MRPL42Q9Y6G3 142 aaKnown RBP12.2□□□□□ -0.46
TRIM40-205ENST00000307859 MYLKQ15746 1914 aa12.2□□□□□ -0.46
TRIM40-205ENST00000307859 WASH4PA8MWX3 477 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 E9PAM4 449 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 ABLIM3O94929 683 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 PTPN3P26045 913 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 ELK3P41970 407 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 MLLT6P55198 1093 aaPredicted RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 COG7P83436 770 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 RING1Q06587 406 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 DMTNQ08495 405 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 EFEMP1Q12805 493 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 BTG3Q14201 252 aaPredicted RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 CCDC85BQ15834 202 aaPredicted RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 SKIDA1Q1XH10 827 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 SPOUT1Q5T280 376 aaKnown RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 SYCP2LQ5T4T6 812 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 PIK3R6Q5UE93 754 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 AFMIDQ63HM1 303 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 KIAA1841Q6NSI8 718 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 RWDD4Q6NW29 188 aaKnown RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 TAOK1Q7L7X3 1001 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 TMCO2Q7Z6W1 182 aaPredicted RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 EXOC3L1Q86VI1 746 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 IGDCC3Q8IVU1 814 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 ARHGAP12Q8IWW6 846 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 ZNF683Q8IZ20 524 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 LZTR1Q8N653 840 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 GIPC2Q8TF65 315 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 OVCA2Q8WZ82 227 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 TMEM169Q96HH4 297 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 TSGA13Q96PP4 275 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 ACSS3Q9H6R3 686 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 SPG21Q9NZD8 308 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 MARCH2Q9P0N8 246 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 FNIP2Q9P278 1114 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 SLC24A2Q9UI40 661 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 SRRM3A6NNA2 597 aaPredicted RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 SEC24AO95486 1093 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 MOCS2O96007 188 aaPredicted RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 APOEP02649 317 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 SRGAP2BP0DMP2 458 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 MLNP12872 115 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 ATP2A2P16615 1042 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms