RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 IFRD1O00458 451 aaPredicted RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 ZSCAN5DPP0CG00 497 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 INHBEP58166 350 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 HYIQ5T013 277 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 SLC44A2Q8IWA5 706 aaPredicted RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 ZNF75CPQ92670 426 aaPredicted RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 KLHL4Q9C0H6 718 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 SPTLC1O15269 473 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 GUCA1CO95843 209 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 MT-CO1P00395 513 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 CALCAP01258 141 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 TRIM60Q495X7 471 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 ANKS6Q68DC2 871 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 TSEN2Q8NCE0 465 aaKnown RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 TMEM159Q96B96 161 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 FAM120BQ96EK7 910 aaKnown RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 KCTD14Q9BQ13 255 aaPredicted RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 DDX28Q9NUL7 540 aaKnown RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 MARCH2Q9P0N8 246 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 VAV3Q9UKW4 847 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 LIASO43766 372 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 SASH3O75995 380 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 STAU1O95793 577 aaKnown RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 ITGB6P18564 788 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 MRPS6P82932 125 aaKnown RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 EIF2B5Q13144 721 aaKnown RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 STARD3Q14849 445 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 ADRM1Q16186 407 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 ZACNQ401N2 412 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 PRAMEF19Q5SWL8 479 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 PSTKQ8IV42 348 aaKnown RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 MIER2Q8N344 545 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 VPS33AQ96AX1 596 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 SH3GL3Q99963 347 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 C10orf88Q9H8K7 445 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 TRUB2O95900 331 aaKnown RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 TNFSF9P41273 254 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 DPY30Q9C005 99 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 ZCCHC2Q9C0B9 1178 aaKnown RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 IL22Q9GZX6 179 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 CDHR5Q9HBB8 845 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 MID1IP1Q9NPA3 183 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 KRCC1Q9NPI7 259 aaPredicted RBP16.25■□□□□ 0.19
USP42-201ENST00000306177 CDH9Q9ULB4 789 aa16.25■□□□□ 0.19
USP42-201ENST00000306177 BCL2L1Q07817 233 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 PRMT9Q6P2P2 845 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 IYDQ6PHW0 289 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 GPR142Q7Z601 462 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 OR56A4Q8NGH8 313 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 NDEL1Q9GZM8 345 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 ZNF711Q9Y462 761 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 SNTNA6NMZ2 147 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 HNRNPCP07910 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
USP42-201ENST00000306177 OR56A5P0C7T3 313 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 IMPDH2P12268 514 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 SERPINH1P50454 418 aaKnown RBP16.24■□□□□ 0.19
USP42-201ENST00000306177 BLVRAP53004 296 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 ZCWPW2Q504Y3 356 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 APLFQ8IW19 511 aaPredicted RBP16.24■□□□□ 0.19
USP42-201ENST00000306177 BTBD10Q9BSF8 475 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 OSGEPL1Q9H4B0 414 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 CAPN10Q9HC96 672 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 HES2Q9Y543 173 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 ADGRA3Q8IWK6 1321 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 A0A087X1B8 175 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 PDE2AO00408 941 aaPredicted RBP16.24■□□□□ 0.19
USP42-201ENST00000306177 USP12O75317 370 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 ZNF682O95780 498 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 ATP6V1B2P21281 511 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 HNRNPH3P31942 346 aaKnown RBP16.24■□□□□ 0.19
USP42-201ENST00000306177 PPP1R13LQ8WUF5 828 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 ZFP42Q96MM3 310 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 SAE1Q9UBE0 346 aaPredicted RBP16.24■□□□□ 0.19
USP42-201ENST00000306177 LYPLA2O95372 231 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 GSNP06396 782 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 TGM3Q08188 693 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 WASHC2DQ5SRD0 308 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 CYP4Z1Q86W10 505 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 ALLCQ8N6M5 410 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 ZMAT2Q96NC0 199 aaKnown RBP16.24■□□□□ 0.19
USP42-201ENST00000306177 ASB2Q96Q27 587 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 THG1LQ9NWX6 298 aaKnown RBP16.24■□□□□ 0.19
USP42-201ENST00000306177 STARD13Q9Y3M8 1113 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 AP4S1Q9Y587 144 aa16.24■□□□□ 0.19
USP42-201ENST00000306177 E7ENQ6 273 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 PCDH8O95206 1070 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 DEFA1P59665 94 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 DEFA3P59666 94 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 ANKRD52Q8NB46 1076 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 PAWRQ96IZ0 340 aaKnown RBP16.23■□□□□ 0.19
USP42-201ENST00000306177 LRRC19Q9H756 370 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 IL1RAPL1Q9NZN1 696 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 NDUFA13Q9P0J0 144 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 ADRA1DP25100 572 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 NOMO3P69849 1222 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 TREML2Q5T2D2 321 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 PANX3Q96QZ0 392 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 SNRNP25Q9BV90 132 aaKnown RBP16.23■□□□□ 0.19
USP42-201ENST00000306177 MIEF1Q9NQG6 463 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms