RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 GOLGA8TH3BQL2 631 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 ALDH2P05091 517 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 CYP2C18P33260 490 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 TUBP50607 506 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 PLEKHG4Q58EX7 1191 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 CERCAMQ5T4B2 595 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 FAM117BQ6P1L5 589 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 RNF19BQ6ZMZ0 732 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 SPATA21Q7Z572 469 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 ANKS4BQ8N8V4 417 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 DNAAF3Q8N9W5 541 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 RMDN2Q96LZ7 410 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 MLPHQ9BV36 600 aaPredicted RBP11.68□□□□□ -0.54
SCG2-201ENST00000305409 XAB2Q9HCS7 855 aaKnown RBP11.68□□□□□ -0.54
SCG2-201ENST00000305409 VANGL2Q9ULK5 521 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 PHF24Q9UPV7 400 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 USP15Q9Y4E8 981 aaPredicted RBP11.68□□□□□ -0.54
SCG2-201ENST00000305409 PCDHA11Q9Y5I1 949 aa11.68□□□□□ -0.54
SCG2-201ENST00000305409 PDE4DIPQ5VU43 2346 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 BPTFQ12830 3046 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.67□□□□□ -0.54
SCG2-201ENST00000305409 CCT8L1PA6NM43 557 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 INPPL1O15357 1258 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 ADAM12O43184 909 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 MT-CYBP00156 380 aaPredicted RBP11.67□□□□□ -0.54
SCG2-201ENST00000305409 IGLV3-25P01717 112 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 PRKCHP24723 683 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 CCR1P32246 355 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 CDK7P50613 346 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 PPIDQ08752 370 aaKnown RBP11.67□□□□□ -0.54
SCG2-201ENST00000305409 DUSP4Q13115 394 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 LRRC8BQ6P9F7 803 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 PDZD4Q76G19 769 aaPredicted RBP11.67□□□□□ -0.54
SCG2-201ENST00000305409 DCP1BQ8IZD4 617 aaKnown RBP11.67□□□□□ -0.54
SCG2-201ENST00000305409 NUP93Q8N1F7 819 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 CNTD1Q8N815 330 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 LRRC8CQ8TDW0 803 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 CCT6BQ92526 530 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 AZIN2Q96A70 460 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 FCRL3Q96P31 734 aaPredicted RBP11.67□□□□□ -0.54
SCG2-201ENST00000305409 MECRQ9BV79 373 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 SLC39A8Q9C0K1 460 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 PCMTD2Q9NV79 361 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 RRN3Q9NYV6 651 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 SENP1Q9P0U3 644 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 KANSL3Q9P2N6 904 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 PHTF1Q9UMS5 762 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 NEU3Q9UQ49 428 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 HS3ST4Q9Y661 456 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 ARHGAP42A6NI28 874 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 SARNPP82979 210 aaKnown RBP11.67□□□□□ -0.54
SCG2-201ENST00000305409 MGAT5Q09328 741 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 GALNT2Q10471 571 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 TTC39BQ5VTQ0 682 aaPredicted RBP11.67□□□□□ -0.54
SCG2-201ENST00000305409 FBXW10Q5XX13 1052 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCG2-201ENST00000305409 CIR1Q86X95 450 aaPredicted RBP11.67□□□□□ -0.54
SCG2-201ENST00000305409 ZNF75CPQ92670 426 aaPredicted RBP11.67□□□□□ -0.54
SCG2-201ENST00000305409 FERMT1Q9BQL6 677 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 RNF208Q9H0X6 261 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 ARHGEF38Q9NXL2 777 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 PCDHB5Q9Y5E4 795 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 RPS6KL1Q9Y6S9 549 aa11.67□□□□□ -0.54
SCG2-201ENST00000305409 TTC24A2A3L6 582 aaPredicted RBP11.66□□□□□ -0.54
SCG2-201ENST00000305409 VNN2O95498 520 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 NEFHP12036 1026 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 PGGT1BP53609 377 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 AIF1P55008 147 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 TAF10Q12962 218 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 EIF4EBP2Q13542 120 aaPredicted RBP11.66□□□□□ -0.54
SCG2-201ENST00000305409 CRYMQ14894 314 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 RASA2Q15283 850 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 PSMD5Q16401 504 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 TEX44Q53QW1 395 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 RASIP1Q5U651 963 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 PIK3R6Q5UE93 754 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 FUT10Q6P4F1 479 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 C4orf22Q6V702 233 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 SH2D5Q6ZV89 423 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 ARHGAP12Q8IWW6 846 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 FTHL17Q9BXU8 183 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 FRMD8Q9BZ67 464 aaPredicted RBP11.66□□□□□ -0.54
SCG2-201ENST00000305409 ATXN3LQ9H3M9 355 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 SMOC2Q9H3U7 446 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 PNPLA8Q9NP80 782 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 FETUBQ9UGM5 382 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 CCDC195A0A1B0GUA6 201 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 FAM159BA6NKW6 160 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 E9PAM4 449 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 SPAG6O75602 509 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 RFPL1O75677 317 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 CNTN5O94779 1100 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 GALTP07902 379 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 SNRPAP09012 282 aaKnown RBP11.66□□□□□ -0.54
SCG2-201ENST00000305409 TSHRP16473 764 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 HCAR3P49019 387 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 BFSP2Q13515 415 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 PDK4Q16654 411 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 TRPM8Q7Z2W7 1104 aa11.66□□□□□ -0.54
SCG2-201ENST00000305409 SPATS2Q86XZ4 545 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms