RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GK3PQ14409 553 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 PABPC1LQ4VXU2 614 aaKnown RBP13.32□□□□□ -0.28
TRIM35-201ENST00000305364 MBLAC2Q68D91 279 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 ZNF354CQ86Y25 554 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 LRRC71Q8N4P6 559 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 TMCO5AQ8N6Q1 288 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 OR52B2Q96RD2 323 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 CAB39LQ9H9S4 337 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 TRPC7Q9HCX4 862 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 FOXD2O60548 495 aaPredicted RBP13.32□□□□□ -0.28
TRIM35-201ENST00000305364 H6PDO95479 791 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 ZNF143P52747 638 aaPredicted RBP13.32□□□□□ -0.28
TRIM35-201ENST00000305364 EFNA5P52803 228 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 PSME3P61289 254 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 SLC25A11Q02978 314 aaKnown RBP13.32□□□□□ -0.28
TRIM35-201ENST00000305364 TBCELQ5QJ74 424 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 LRTOMTQ8WZ04 291 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 AZIN2Q96A70 460 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 SDCCAG3Q96C92 435 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 ZMAT2Q96NC0 199 aaKnown RBP13.32□□□□□ -0.28
TRIM35-201ENST00000305364 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 POLR1BQ9H9Y6 1135 aa13.32□□□□□ -0.28
TRIM35-201ENST00000305364 VILLO15195 856 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 CLOCKO15516 846 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 NME5P56597 212 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 RYBPQ8N488 228 aaPredicted RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 PPP1R14BQ96C90 147 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 COX4I2Q96KJ9 171 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 BEGAINQ9BUH8 593 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 IARS2Q9NSE4 1012 aaKnown RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 PLK2Q9NYY3 685 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 GGA3Q9NZ52 723 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 NR2E3Q9Y5X4 410 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 KIAA1551Q9HCM1 1747 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 TRIM38O00635 465 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 IL1BP01584 269 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 PGAM1P18669 254 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 CPOXP36551 454 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 RPL26P61254 145 aaKnown RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 SPP2Q13103 211 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 OGFRL1Q5TC84 451 aaPredicted RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 TMEM198Q66K66 360 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 ZNF410Q86VK4 478 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 ZNF276Q8N554 614 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 HTR3CQ8WXA8 447 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 CCDC97Q96F63 343 aaPredicted RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 TMEM176AQ96HP8 235 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 CYP4F12Q9HCS2 524 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 TRNAU1APQ9NX07 287 aaKnown RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 BLOC1S6Q9UL45 172 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 ADAMTSL3P82987 1691 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 PHGDHO43175 533 aaKnown RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 OATP04181 439 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 PDGFRBP09619 1106 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 FGF3P11487 239 aaPredicted RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 KPNA2P52292 529 aaKnown RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 GADL1Q6ZQY3 521 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 KBTBD6Q86V97 674 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 SMYD1Q8NB12 490 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 FNDC8Q8TC99 324 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 SNRNP25Q9BV90 132 aaKnown RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 KLHL25Q9H0H3 589 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 UBAP1Q9NZ09 502 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 PPME1Q9Y570 386 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 DENRO43583 198 aaKnown RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 METTL18O95568 372 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 ADORA2BP29275 332 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 GMPRP36959 345 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 PTGER2P43116 358 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 GRIA4P48058 902 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 RALGDSQ12967 914 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 STILQ15468 1287 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 LSM12Q3MHD2 195 aaKnown RBP13.31□□□□□ -0.28
TRIM35-201ENST00000305364 TEX44Q53QW1 395 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 GRTP1Q5TC63 336 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 XYLT1Q86Y38 959 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 SCUBE3Q8IX30 993 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 NIPA2Q8N8Q9 360 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 GAB3Q8WWW8 586 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 VPS50Q96JG6 964 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 LRRC40Q9H9A6 602 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 ARHGAP28Q9P2N2 729 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 AP4E1Q9UPM8 1137 aa13.31□□□□□ -0.28
TRIM35-201ENST00000305364 TRPC5OSA6NMA1 111 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 SNNO75324 88 aaPredicted RBP13.3□□□□□ -0.28
TRIM35-201ENST00000305364 TIPRLO75663 272 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 BCL10O95999 233 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 PRKCHP24723 683 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 GRIA3P42263 894 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 TGFB2P61812 414 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 GBE1Q04446 702 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 CDK18Q07002 472 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 NME3Q13232 169 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 NR1D2Q14995 579 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 GOLGA7BQ2TAP0 167 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 METTL21CQ5VZV1 264 aa13.3□□□□□ -0.28
TRIM35-201ENST00000305364 DHFR2Q86XF0 187 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms