RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CLEC4EQ9ULY5 219 aa27.93■■■□□ 2.06
HDAC3-201ENST00000305264 RHOQP17081 205 aa27.93■■■□□ 2.06
HDAC3-201ENST00000305264 COPS2P61201 443 aa27.93■■■□□ 2.06
HDAC3-201ENST00000305264 PPP2R5EQ16537 467 aa27.93■■■□□ 2.06
HDAC3-201ENST00000305264 MPP7Q5T2T1 576 aa27.93■■■□□ 2.06
HDAC3-201ENST00000305264 RNF43Q68DV7 783 aa27.93■■■□□ 2.06
HDAC3-201ENST00000305264 CPA6Q8N4T0 437 aa27.93■■■□□ 2.06
HDAC3-201ENST00000305264 WFDC5Q8TCV5 224 aa27.93■■■□□ 2.06
HDAC3-201ENST00000305264 CATSPERBQ9H7T0 1116 aa27.93■■■□□ 2.06
HDAC3-201ENST00000305264 DCLK1O15075 740 aa27.92■■■□□ 2.06
HDAC3-201ENST00000305264 CDH4P55283 916 aa27.92■■■□□ 2.06
HDAC3-201ENST00000305264 GAB4Q2WGN9 574 aa27.92■■■□□ 2.06
HDAC3-201ENST00000305264 SEL1L2Q5TEA6 688 aa27.92■■■□□ 2.06
HDAC3-201ENST00000305264 CHST9Q7L1S5 443 aa27.92■■■□□ 2.06
HDAC3-201ENST00000305264 RFX6Q8HWS3 928 aa27.92■■■□□ 2.06
HDAC3-201ENST00000305264 RTL3Q8N8U3 475 aaKnown RBP27.92■■■□□ 2.06
HDAC3-201ENST00000305264 COG1Q8WTW3 980 aa27.92■■■□□ 2.06
HDAC3-201ENST00000305264 OSBPL8Q9BZF1 889 aa27.92■■■□□ 2.06
HDAC3-201ENST00000305264 TMEM248Q9NWD8 314 aa27.92■■■□□ 2.06
HDAC3-201ENST00000305264 HOXC11O43248 304 aaPredicted RBP27.91■■■□□ 2.06
HDAC3-201ENST00000305264 ZNF500O60304 480 aaPredicted RBP27.91■■■□□ 2.06
HDAC3-201ENST00000305264 PTPN7P35236 360 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 CARNMT1Q8N4J0 409 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 MIA3Q5JRA6 1907 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 KIF2AO00139 706 aaPredicted RBP27.91■■■□□ 2.06
HDAC3-201ENST00000305264 CLDN11O75508 207 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 LUC7L3O95232 432 aaKnown RBP27.91■■■□□ 2.06
HDAC3-201ENST00000305264 DYNLT1P63172 113 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 AMPD2Q01433 879 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 GAD2Q05329 585 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 TDGQ13569 410 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 C12orf40Q86WS4 652 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 NPWQ8N729 165 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 TRIOO75962 3097 aa27.91■■■□□ 2.06
HDAC3-201ENST00000305264 ITPRIPL2Q3MIP1 535 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 NCBP2-AS2Q69YL0 99 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 MFN1Q8IWA4 741 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 NAT16Q8N8M0 369 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 ZNF592Q92610 1267 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 CHFRQ96EP1 664 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 MAK16Q9BXY0 300 aaKnown RBP27.9■■■□□ 2.06
HDAC3-201ENST00000305264 KIAA1549LQ6ZVL6 1849 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 WASH4PA8MWX3 477 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 ZNF185O15231 689 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 CEP104O60308 925 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 CDH18Q13634 790 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 SLC9A4Q6AI14 798 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 PLD5Q8N7P1 536 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 NETO2Q8NC67 525 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 OR52K2Q8NGK3 314 aa27.9■■■□□ 2.06
HDAC3-201ENST00000305264 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.9■■■□□ 2.06
HDAC3-201ENST00000305264 NUP205Q92621 2012 aa27.89■■■□□ 2.06
HDAC3-201ENST00000305264 OR1E1P30953 314 aa27.89■■■□□ 2.06
HDAC3-201ENST00000305264 GJA4P35212 333 aa27.89■■■□□ 2.06
HDAC3-201ENST00000305264 CETN2P41208 172 aa27.89■■■□□ 2.06
HDAC3-201ENST00000305264 FSCBQ5H9T9 825 aa27.89■■■□□ 2.06
HDAC3-201ENST00000305264 CXorf57Q6NSI4 855 aaKnown RBP27.89■■■□□ 2.06
HDAC3-201ENST00000305264 TMCO3Q6UWJ1 677 aa27.89■■■□□ 2.06
HDAC3-201ENST00000305264 CSGALNACT1Q8TDX6 532 aa27.89■■■□□ 2.06
HDAC3-201ENST00000305264 PBKQ96KB5 322 aa27.89■■■□□ 2.06
HDAC3-201ENST00000305264 KLC2Q9H0B6 622 aa27.89■■■□□ 2.06
HDAC3-201ENST00000305264 SAR1BQ9Y6B6 198 aa27.89■■■□□ 2.06
HDAC3-201ENST00000305264 H0Y626 953 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 CACNG3O60359 315 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 CST8O60676 142 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 TUBB4AP04350 444 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 TCP1P17987 556 aaKnown RBP27.88■■■□□ 2.05
HDAC3-201ENST00000305264 SOX9P48436 509 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 NR1H3Q13133 447 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 NAIF1Q69YI7 327 aaPredicted RBP27.88■■■□□ 2.05
HDAC3-201ENST00000305264 MS4A14Q96JA4 679 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 CHD5Q8TDI0 1954 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.88■■■□□ 2.05
HDAC3-201ENST00000305264 TCRBV7S2A1N4TA0A589 114 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 APOL1O14791 398 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 MFSD11O43934 449 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 MAPKAPK2P49137 400 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 ZNF177Q13360 481 aaPredicted RBP27.88■■■□□ 2.05
HDAC3-201ENST00000305264 ETFBKMTQ8IXQ9 262 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 EFR3BQ9Y2G0 817 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 TBC1D30Q9Y2I9 924 aa27.88■■■□□ 2.05
HDAC3-201ENST00000305264 TRIM24O15164 1050 aa27.87■■■□□ 2.05
HDAC3-201ENST00000305264 SRFP11831 508 aa27.87■■■□□ 2.05
HDAC3-201ENST00000305264 PRLRP16471 622 aa27.87■■■□□ 2.05
HDAC3-201ENST00000305264 ASTLQ6HA08 431 aaPredicted RBP27.87■■■□□ 2.05
HDAC3-201ENST00000305264 BBS12Q6ZW61 710 aa27.87■■■□□ 2.05
HDAC3-201ENST00000305264 TP53INP2Q8IXH6 220 aa27.87■■■□□ 2.05
HDAC3-201ENST00000305264 CELF6Q96J87 481 aaKnown RBP27.87■■■□□ 2.05
HDAC3-201ENST00000305264 NOL6Q9H6R4 1146 aaKnown RBP27.87■■■□□ 2.05
HDAC3-201ENST00000305264 TRPV5Q9NQA5 729 aa27.87■■■□□ 2.05
HDAC3-201ENST00000305264 SMARCAL1Q9NZC9 954 aa27.87■■■□□ 2.05
HDAC3-201ENST00000305264 NUMBP49757 651 aa27.86■■■□□ 2.05
HDAC3-201ENST00000305264 GBE1Q04446 702 aa27.86■■■□□ 2.05
HDAC3-201ENST00000305264 KLF1Q13351 362 aaPredicted RBP27.86■■■□□ 2.05
HDAC3-201ENST00000305264 TFDP2Q14188 446 aa27.86■■■□□ 2.05
HDAC3-201ENST00000305264 IER5LQ5T953 404 aa27.86■■■□□ 2.05
HDAC3-201ENST00000305264 NPNTQ6UXI9 565 aa27.86■■■□□ 2.05
HDAC3-201ENST00000305264 SLC13A5Q86YT5 568 aaPredicted RBP27.86■■■□□ 2.05
HDAC3-201ENST00000305264 DNASE1L2Q92874 299 aa27.86■■■□□ 2.05
HDAC3-201ENST00000305264 RETREG1Q9H6L5 497 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms