RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PAGE1O75459 146 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 IGLV3-19P01714 112 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 MMP8P22894 467 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 PLEKHG6Q3KR16 790 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 TRIM61Q5EBN2 209 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 SYCP2LQ5T4T6 812 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 DHX40Q8IX18 779 aaKnown RBP27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 TOE1Q96GM8 510 aaKnown RBP27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 ZNF419Q96HQ0 510 aaPredicted RBP27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 HSPA12BQ96MM6 686 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 TBCBQ99426 244 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 PRSS16Q9NQE7 514 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 TMEM74BQ9NUR3 256 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 WSB2Q9NYS7 404 aaPredicted RBP27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 TMEM59LQ9UK28 342 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 VANGL2Q9ULK5 521 aa27.28■■□□□ 1.96
CDKN2A-201ENST00000304494 LAMA1P25391 3075 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 ATXN2Q99700 1313 aaKnown RBP27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 PATE3B3GLJ2 98 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 C7P10643 843 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 TFE3P19532 575 aaPredicted RBP27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 FLT3P36888 993 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 ZNF165P49910 485 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 ECT2LQ008S8 904 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 ZBTB16Q05516 673 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 RNF219Q5W0B1 726 aaPredicted RBP27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 CIR1Q86X95 450 aaPredicted RBP27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 CACUL1Q86Y37 369 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 NUP58Q9BVL2 599 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 ADAM33Q9BZ11 813 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 ERVW-1Q9UQF0 538 aa27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 TNRC6BQ9UPQ9 1833 aaKnown RBP27.27■■□□□ 1.96
CDKN2A-201ENST00000304494 ADCY5O95622 1261 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 CCDC172P0C7W6 258 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 IRX4P78413 519 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 ARID5BQ14865 1188 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 FILIP1LQ4L180 1135 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 SLC23A3Q6PIS1 610 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 SLC41A1Q8IVJ1 513 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 CADM4Q8NFZ8 388 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 IGSF8Q969P0 613 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 MYO19Q96H55 970 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 MRGPRX3Q96LB0 322 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 SIK2Q9H0K1 926 aa27.26■■□□□ 1.95
CDKN2A-201ENST00000304494 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 CLDN11O75508 207 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 PDGFRAP16234 1089 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 RDXP35241 583 aaKnown RBP27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 NSFP46459 744 aaKnown RBP27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 PLK1P53350 603 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 CENPCQ03188 943 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 SULT2A1Q06520 285 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 ZNF177Q13360 481 aaPredicted RBP27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 DUOXA1Q1HG43 343 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 KLHL40Q2TBA0 621 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 HNRNPA1L2Q32P51 320 aaKnown RBP27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 C5orf22Q49AR2 442 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 WDR45BQ5MNZ6 344 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 APCDD1Q8J025 514 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 SLC30A5Q8TAD4 765 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 CFAP57Q96MR6 1250 aa27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 METTL5Q9NRN9 209 aaKnown RBP27.25■■□□□ 1.95
CDKN2A-201ENST00000304494 DNTTP04053 509 aa27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 UNGP13051 313 aaPredicted RBP27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 NNMTP40261 264 aa27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 CTSOP43234 321 aaPredicted RBP27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 ZNF776Q68DI1 518 aaPredicted RBP27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 CXorf57Q6NSI4 855 aaKnown RBP27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 LRRC31Q6UY01 552 aa27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 RGL4Q8IZJ4 473 aa27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 C1orf74Q96LT6 269 aa27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 C11orf70Q9BRQ4 267 aa27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 GPR174Q9BXC1 333 aa27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 TMEM9BQ9NQ34 198 aa27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 RTN4Q9NQC3 1192 aaKnown RBP27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 CACNA1AO00555 2505 aa27.24■■□□□ 1.95
CDKN2A-201ENST00000304494 ITIH6Q6UXX5 1313 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 RNASEH1O60930 286 aaKnown RBP27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 CFIP05156 583 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 FERP16591 822 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 PTMSP20962 102 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 GGCXP38435 758 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 CDH4P55283 916 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 RPS14P62263 151 aaKnown RBP27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 CLEC16AQ2KHT3 1053 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 TTC31Q49AM3 519 aaPredicted RBP27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 TRNP1Q6NT89 227 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 BNIPLQ7Z465 357 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 FUCA2Q9BTY2 467 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 PCED1AQ9H1Q7 454 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 RSPH9Q9H1X1 276 aaPredicted RBP27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 SEPT11Q9NVA2 429 aaKnown RBP27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 SUSD2Q9UGT4 822 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 SCML1Q9UN30 329 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 SLC6A14Q9UN76 642 aa27.23■■□□□ 1.95
CDKN2A-201ENST00000304494 EDDM13A0A1B0GTR0 161 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 TARSL2A2RTX5 802 aaKnown RBP27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 MEI4A8MW99 385 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 TEX33O43247 280 aa27.22■■□□□ 1.95
CDKN2A-201ENST00000304494 SERPINF2P08697 491 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms