RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SLC27A6Q9Y2P4 619 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 CAPN6Q9Y6Q1 641 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 KIAA1549LQ6ZVL6 1849 aa25.2■■□□□ 1.62
HOXC9-201ENST00000303450 TBC1D3BA6NDS4 549 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 DAPK3O43293 454 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 PSTPIP1O43586 416 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 RHOQP17081 205 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 GOT1P17174 413 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 HLA-FP30511 346 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 MESP2Q0VG99 397 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 ODF2Q5BJF6 829 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 ASTLQ6HA08 431 aaPredicted RBP25.19■■□□□ 1.62
HOXC9-201ENST00000303450 PHTF2Q8N3S3 785 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 TERB1Q8NA31 727 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 FOXQ1Q9C009 403 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 EPHX3Q9H6B9 360 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 RETREG1Q9H6L5 497 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 CATSPERBQ9H7T0 1116 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 PCDH18Q9HCL0 1135 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 ABCB8Q9NUT2 735 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 KLHL11Q9NVR0 708 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 NEU3Q9UQ49 428 aa25.19■■□□□ 1.62
HOXC9-201ENST00000303450 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.19■■□□□ 1.62
HOXC9-201ENST00000303450 FAM170BA6NMN3 283 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 H3BRJ5 948 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 FGF10O15520 208 aaPredicted RBP25.18■■□□□ 1.62
HOXC9-201ENST00000303450 OR1E1P30953 314 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 HOXC13P31276 330 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 PDK2Q15119 407 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 FSCBQ5H9T9 825 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 FSTL4Q6MZW2 842 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 RFX8Q6ZV50 586 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 ANKS1BQ7Z6G8 1248 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 MAP7D3Q8IWC1 876 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 DDX56Q9NY93 547 aaKnown RBP25.18■■□□□ 1.62
HOXC9-201ENST00000303450 CWC15Q9P013 229 aaKnown RBP25.18■■□□□ 1.62
HOXC9-201ENST00000303450 KIAA1522Q9P206 1035 aaPredicted RBP25.18■■□□□ 1.62
HOXC9-201ENST00000303450 GGA2Q9UJY4 613 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 PYCARDQ9ULZ3 195 aa25.18■■□□□ 1.62
HOXC9-201ENST00000303450 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.18■■□□□ 1.62
HOXC9-201ENST00000303450 PDGFBP01127 241 aaPredicted RBP25.17■■□□□ 1.62
HOXC9-201ENST00000303450 TARSP26639 723 aaKnown RBP25.17■■□□□ 1.62
HOXC9-201ENST00000303450 CD70P32970 193 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 HCAR3P49019 387 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 OXCT1P55809 520 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 LMAN2Q12907 356 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 C6orf118Q5T5N4 469 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 PEX26Q7Z412 305 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 TMEM248Q9NWD8 314 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 TRMT1Q9NXH9 659 aaKnown RBP25.17■■□□□ 1.62
HOXC9-201ENST00000303450 AMFRQ9UKV5 643 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 TBC1D30Q9Y2I9 924 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 MTF2Q9Y483 593 aaPredicted RBP25.17■■□□□ 1.62
HOXC9-201ENST00000303450 EGFP01133 1207 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 PABPC1P11940 636 aaKnown RBP25.17■■□□□ 1.62
HOXC9-201ENST00000303450 CXorf57Q6NSI4 855 aaKnown RBP25.17■■□□□ 1.62
HOXC9-201ENST00000303450 SETD3Q86TU7 594 aaPredicted RBP25.17■■□□□ 1.62
HOXC9-201ENST00000303450 NLRP14Q86W24 1093 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 ALS2CR12Q96Q35 445 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 CALN1Q9BXU9 219 aa25.17■■□□□ 1.62
HOXC9-201ENST00000303450 A0A0A0MRY4 1105 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 LRRD1A4D1F6 860 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 NCAM2O15394 837 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 KRT1P04264 644 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 RHOCP08134 193 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 CD48P09326 243 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 MAPKAPK2P49137 400 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 ARSEP51690 589 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 DPYSL3Q14195 570 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 GEN1Q17RS7 908 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 NT5DC3Q86UY8 548 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 REXO1L1PQ8IX06 675 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 AHI1Q8N157 1196 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.16■■□□□ 1.62
HOXC9-201ENST00000303450 RTL3Q8N8U3 475 aaKnown RBP25.16■■□□□ 1.62
HOXC9-201ENST00000303450 PJA1Q8NG27 643 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 FAM71BQ8TC56 605 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 WFIKKN2Q8TEU8 576 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 RAPGEF5Q92565 580 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 CSPG4P5Q96PW8 444 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 OSBPL6Q9BZF3 934 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 DONSONQ9NYP3 566 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 RCOR3Q9P2K3 495 aaPredicted RBP25.16■■□□□ 1.62
HOXC9-201ENST00000303450 ZNF212Q9UDV6 495 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 DNAI1Q9UI46 699 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 SIT1Q9Y3P8 196 aa25.16■■□□□ 1.62
HOXC9-201ENST00000303450 FTCDO95954 541 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 KDELR1P24390 212 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 TNFRSF4P43489 277 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 SLC12A1Q13621 1099 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 CCINQ13939 588 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 LRRC32Q14392 662 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 DGKKQ5KSL6 1271 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 SFTPA1Q8IWL2 248 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 ZNF687Q8N1G0 1237 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 TSC1Q92574 1164 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 LMLNQ96KR4 655 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 LMAN1LQ9HAT1 526 aa25.15■■□□□ 1.62
HOXC9-201ENST00000303450 CCDC66A2RUB6 948 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 WASH4PA8MWX3 477 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms