RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ADAM21Q9UKJ8 722 aa7.96□□□□□ -1.14
SCN9A-201ENST00000303354 RTN3O95197 1032 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 GLRA2P23416 452 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 PRKG2Q13237 762 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ATP6AP1LQ52LC2 224 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ICE2Q659A1 982 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 FAM151BQ6UXP7 276 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 FAM83AQ86UY5 434 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 SLC9A9Q8IVB4 645 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 TEX9Q8N6V9 391 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 RANBP17Q9H2T7 1088 aaKnown RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 DPEP2Q9H4A9 486 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 SDR42E2A6NKP2 422 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 CASP5P51878 434 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 RCAN1P53805 252 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 SPIDRQ14159 915 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 LRRC74BQ6ZQY2 392 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 PCYOX1LQ8NBM8 494 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ZSCAN18Q8TBC5 510 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 RPL10LQ96L21 214 aaKnown RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 GID8Q9NWU2 228 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 IMPAD1Q9NX62 359 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 EPHX1P07099 455 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 SSTR1P30872 391 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 RAB27AP51159 221 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 SMAD3P84022 425 aaKnown RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 RAPSNQ13702 412 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 USP45Q70EL2 814 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 KLHL23Q8NBE8 558 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 SMPDL3BQ92485 455 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 LRRC40Q9H9A6 602 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ARL15Q9NXU5 204 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 CDY1Q9Y6F8 540 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 TCRBV5S4A2TA0A5A2 114 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 NBNO60934 754 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 DHPSP49366 369 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 TEDDM1Q5T9Z0 273 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 UTS2BQ765I0 119 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 LMLNQ96KR4 655 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 SLC4A9Q96Q91 983 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 MAP3K14Q99558 947 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 BPIFA3Q9BQP9 254 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 HGH1Q9BTY7 390 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 MRPL40Q9NQ50 206 aaKnown RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 HEY2Q9UBP5 337 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 HAO1Q9UJM8 370 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 LRATO95237 230 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 PRKCGP05129 697 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 CLUP10909 449 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 MMP13P45452 471 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 DGKEP52429 567 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 TAF5Q15542 800 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 CCDC149Q6ZUS6 474 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 TBCBQ99426 244 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 CNPY3Q9BT09 278 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 WDR18Q9BV38 432 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ELL3Q9HB65 397 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 BTRCQ9Y297 605 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 KLHL20Q9Y2M5 609 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ERAL1O75616 437 aaKnown RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ADH1AP07327 375 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 MPP3Q13368 585 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 XRRA1Q6P2D8 792 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF677Q86XU0 584 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ZC3H7AQ8IWR0 971 aaKnown RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 PWWP2AQ96N64 755 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 B3GNT5Q9BYG0 378 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 RHOBTB2Q9BYZ6 727 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 PARVBQ9HBI1 364 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ZBTB14O43829 449 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 SCN2BO60939 215 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 FARP2O94887 1054 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 STATHP02808 62 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 PSMB4P28070 264 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ELAVL2Q12926 359 aaKnown RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 KCNMB4Q86W47 210 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 FAM228AQ86W67 206 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 CD302Q8IX05 232 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 OR52K1Q8NGK4 314 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 MTERF3Q96E29 417 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 PTPN18Q99952 460 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 DPY30Q9C005 99 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 YY1AP1Q9H869 796 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 ACTR5Q9H9F9 607 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-201ENST00000303354 EQTNQ9NQ60 294 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 LYVE1Q9Y5Y7 322 aa7.95□□□□□ -1.14
SCN9A-201ENST00000303354 PABPC1LQ4VXU2 614 aaKnown RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 AGKQ53H12 422 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 C2orf27AQ580R0 203 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 C16orf89Q6UX73 402 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 MTMR8Q96EF0 704 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ANO9A1A5B4 782 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 RRM2P31350 389 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 MRPL28Q13084 256 aaKnown RBP7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF470Q6ECI4 717 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF280BQ86YH2 543 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 FAM20CQ8IXL6 584 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 KCNS3Q9BQ31 491 aa7.94□□□□□ -1.14
SCN9A-201ENST00000303354 MLPHQ9BV36 600 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms