RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 FAM204AQ9H8W3 233 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 WSB2Q9NYS7 404 aaPredicted RBP11.62□□□□□ -0.55
CLCC1-201ENST00000302500 TAS2R14Q9NYV8 317 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 EVLQ9UI08 416 aaPredicted RBP11.62□□□□□ -0.55
CLCC1-201ENST00000302500 NENFQ9UMX5 172 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 SNX10Q9Y5X0 201 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 SLCO1B1Q9Y6L6 691 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 PCNX2A6NKB5 2137 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 TMEM131Q92545 1883 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 CHD8Q9HCK8 2581 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 FREM2Q5SZK8 3169 aa11.62□□□□□ -0.55
CLCC1-201ENST00000302500 PES1O00541 588 aaKnown RBP11.61□□□□□ -0.55
CLCC1-201ENST00000302500 SLC30A4O14863 429 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 APOEP02649 317 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 SLC2A3P11169 496 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 RFC1P35251 1148 aaPredicted RBP11.61□□□□□ -0.55
CLCC1-201ENST00000302500 ID4P47928 161 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 TPMTP51580 245 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 OGDHQ02218 1023 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 ZNF252P-AS1Q0IIN9 211 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 HNRNPA1L2Q32P51 320 aaKnown RBP11.61□□□□□ -0.55
CLCC1-201ENST00000302500 ZSCAN23Q3MJ62 389 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 C9orf64Q5T6V5 341 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 TTC39BQ5VTQ0 682 aaPredicted RBP11.61□□□□□ -0.55
CLCC1-201ENST00000302500 CYP4V2Q6ZWL3 525 aaPredicted RBP11.61□□□□□ -0.55
CLCC1-201ENST00000302500 CHSY1Q86X52 802 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 TMPRSS6Q8IU80 811 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 ARFGAP1Q8N6T3 406 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 ATP6V0D2Q8N8Y2 350 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 ZNF557Q8N988 423 aaPredicted RBP11.61□□□□□ -0.55
CLCC1-201ENST00000302500 C3orf20Q8ND61 904 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 NEK11Q8NG66 645 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 DNASE2BQ8WZ79 361 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 PTPRN2Q92932 1015 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 ERLEC1Q96DZ1 483 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 FAM129BQ96TA1 746 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 AGPAT1Q99943 283 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 C11orf70Q9BRQ4 267 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 CIPCQ9C0C6 399 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 CEP295Q9C0D2 2601 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 TKTL2Q9H0I9 626 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 RSPH9Q9H1X1 276 aaPredicted RBP11.61□□□□□ -0.55
CLCC1-201ENST00000302500 CAPN10Q9HC96 672 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 METTL5Q9NRN9 209 aaKnown RBP11.61□□□□□ -0.55
CLCC1-201ENST00000302500 VPS45Q9NRW7 570 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 RAB23Q9ULC3 237 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 CEP83Q9Y592 693 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 ZFHX4Q86UP3 3567 aa11.61□□□□□ -0.55
CLCC1-201ENST00000302500 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 LRRC53A6NM62 1247 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 PRR5-ARHGAP8B1AHC4 643 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 F5H5T6 163 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 FAM72CH0Y354 149 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 RNF103O00237 685 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ZNF217O75362 1048 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ZNF821O75541 412 aaPredicted RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ZMPSTE24O75844 475 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 RHOBTB1O94844 696 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 CD160O95971 181 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ITPKAP23677 461 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 STK19P49842 368 aaPredicted RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SULT1E1P49888 294 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 RPS14P62263 151 aaKnown RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ARHGAP8P85298 464 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SEMA3BQ13214 749 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 NME3Q13232 169 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 MTA1Q13330 715 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SLC12A1Q13621 1099 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 C15orf59Q2T9L4 293 aaPredicted RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 FAM72AQ5TYM5 149 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 FAM72DQ6L9T8 149 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SLC23A3Q6PIS1 610 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 STRADAQ7RTN6 431 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ZNF571Q7Z3V5 609 aaPredicted RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 NLRP14Q86W24 1093 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 FAM72BQ86X60 149 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 TMEFF1Q8IYR6 380 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 OR2T3Q8NH03 318 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 NETO1Q8TDF5 533 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 HAPLN3Q96S86 360 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 DDX50Q9BQ39 737 aaKnown RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 FEM1AQ9BSK4 669 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 NAT10Q9H0A0 1025 aaKnown RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 PRDM16Q9HAZ2 1276 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 STIM2Q9P246 746 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SERGEFQ9UGK8 458 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SLCO3A1Q9UIG8 710 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 VANGL2Q9ULK5 521 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 STAP1Q9ULZ2 295 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 CYP8B1Q9UNU6 501 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ERVW-1Q9UQF0 538 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 CELSR3Q9NYQ7 3312 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 CABIN1Q9Y6J0 2220 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 AKAP13Q12802 2813 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SIGLEC16A6NMB1 481 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SMTNL1A8MU46 457 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 TTC34A8MYJ7 566 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 DDX3XO00571 662 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ATP9BO43861 1147 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SIN3BO75182 1162 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms