RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ARHGEF18Q6ZSZ5 1173 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 NLRP14Q86W24 1093 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 ARL14EPQ8N8R7 260 aaPredicted RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 DEPDC1BQ8WUY9 529 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 ARNTL2Q8WYA1 636 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 CPT1BQ92523 772 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 IGSF8Q969P0 613 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 CYP2S1Q96SQ9 504 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 TSPYL1Q9H0U9 437 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 RAB6BQ9NRW1 208 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 NDFIP2Q9NV92 336 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 DNAJC17Q9NVM6 304 aaKnown RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 A0A0A0MRY4 1105 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 CNTN5O94779 1100 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 OLFM2O95897 454 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 CKMP06732 381 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 HDCP19113 662 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 HSD17B3P37058 310 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 PMS2P54278 862 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 SMAD3P84022 425 aaKnown RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 RAB30Q15771 203 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 ALFQ53S48 1182 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 ANKRD22Q5VYY1 191 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 C4orf22Q6V702 233 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 RBM23Q86U06 439 aaKnown RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 HOOK3Q86VS8 718 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 ARHGAP12Q8IWW6 846 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 LGI2Q8N0V4 545 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 ZCCHC9Q8N567 271 aaKnown RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 ATPAF2Q8N5M1 289 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 MAB21L3Q8N8X9 362 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 PRCCQ92733 491 aaPredicted RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 ZBTB9Q96C00 473 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 ZFRQ96KR1 1074 aaKnown RBP13.34□□□□□ -0.27
CCDC7-202ENST00000302316 PWWP2AQ96N64 755 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 SPATA13Q96N96 652 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 CEP41Q9BYV8 373 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 TXLNGYQ9BZA5 131 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 TMEM248Q9NWD8 314 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 HCFC1R1Q9NWW0 138 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 DONSONQ9NYP3 566 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 CPQQ9Y646 472 aa13.34□□□□□ -0.27
CCDC7-202ENST00000302316 MTCL1Q9Y4B5 1905 aaKnown RBP13.33□□□□□ -0.28
CCDC7-202ENST00000302316 GOLGA6BA6NDN3 693 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 DRGXA6NNA5 263 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 KCNK1O00180 336 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 KLKB1P03952 638 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 GJA1P17302 382 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 HOXA9P31269 272 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 SLC6A4P31645 630 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 FAM193AP78312 1265 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 UAP1Q16222 522 aaPredicted RBP13.33□□□□□ -0.28
CCDC7-202ENST00000302316 FAM133BQ5BKY9 247 aaKnown RBP13.33□□□□□ -0.28
CCDC7-202ENST00000302316 CFAP58Q5T655 872 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 FAXCQ5TGI0 409 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 ADGRD2Q7Z7M1 963 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 CIR1Q86X95 450 aaPredicted RBP13.33□□□□□ -0.28
CCDC7-202ENST00000302316 CCDC13Q8IYE1 715 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 NAT8LQ8N9F0 302 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 DPP7Q9UHL4 492 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 HCFC2Q9Y5Z7 792 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 GOLGA8MH3BSY2 632 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 OPHN1O60890 802 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 XYLBO75191 536 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 TMEM63AO94886 807 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 WASHC5Q12768 1159 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 ANKRD20A2Q5SQ80 823 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 ANKRD20A1Q5TYW2 823 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 ANKRD20A3Q5VUR7 823 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 RFWD3Q6PCD5 774 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 GDPD5Q8WTR4 605 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 WBP2Q969T9 261 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 AZIN2Q96A70 460 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 MYEOVQ96EZ4 313 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 RUFY1Q96T51 708 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 FOXP3Q9BZS1 431 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 SLC39A8Q9C0K1 460 aa13.33□□□□□ -0.28
CCDC7-202ENST00000302316 AGO1Q9UL18 857 aaKnown RBP13.33□□□□□ -0.28
CCDC7-202ENST00000302316 LAMA3Q16787 3333 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 TRAV19A0A0A6YYK7 116 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 TCRBV7S3A2A0A539 114 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 SMAPO00193 183 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 CHADO15335 359 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 MTSS1O43312 755 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 HNRNPA1P09651 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC7-202ENST00000302316 PTPN2P17706 415 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 KCNJ11Q14654 390 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 SPDYCQ5MJ68 293 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 RABGAP1LQ5R372 815 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 SYCP2LQ5T4T6 812 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 STXBP5Q5T5C0 1151 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 ALS2CLQ60I27 953 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 AFMIDQ63HM1 303 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 ELMSAN1Q6PJG2 1045 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 CEP128Q6ZU80 1094 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 ZNF567Q8N184 647 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 TTC16Q8NEE8 873 aa13.32□□□□□ -0.28
CCDC7-202ENST00000302316 RBM15Q96T37 977 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC7-202ENST00000302316 SLC28A3Q9HAS3 691 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms