RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CHRNGP07510 517 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 ME2P23368 584 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 MPSTP25325 297 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 PTGER2P43116 358 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 STILQ15468 1287 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 DACT2Q5SW24 774 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 TMEM198Q66K66 360 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 STEAP4Q687X5 459 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CLVS1Q8IUQ0 354 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 PGAM4Q8N0Y7 254 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 PCDH19Q8TAB3 1148 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CNKSR2Q8WXI2 1034 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CNDP1Q96KN2 507 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 PDCD2LQ9BRP1 358 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 NUF2Q9BZD4 464 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CNOT11Q9UKZ1 510 aaKnown RBP11.14□□□□□ -0.63
ZNF558-201ENST00000301475 CDC14AQ9UNH5 594 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 MYRFQ9Y2G1 1151 aa11.14□□□□□ -0.63
ZNF558-201ENST00000301475 PIK3R2O00459 728 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 CBFA2T3O75081 653 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 ALDH1A2O94788 518 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 IDO1P14902 403 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 HMGB2P26583 209 aaKnown RBP11.13□□□□□ -0.63
ZNF558-201ENST00000301475 GABRB3P28472 473 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 CAP2P40123 477 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 CCR10P46092 362 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 BCAR1P56945 870 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 NUP107P57740 925 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 EMC2Q15006 297 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 CA9Q16790 459 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 LSM12Q3MHD2 195 aaKnown RBP11.13□□□□□ -0.63
ZNF558-201ENST00000301475 FAM102AQ5T9C2 384 aaPredicted RBP11.13□□□□□ -0.63
ZNF558-201ENST00000301475 CASC4Q6P4E1 433 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 FASTKD5Q7L8L6 764 aaKnown RBP11.13□□□□□ -0.63
ZNF558-201ENST00000301475 GPR180Q86V85 440 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 TMEM130Q8N3G9 435 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 TDRD5Q8NAT2 981 aaKnown RBP11.13□□□□□ -0.63
ZNF558-201ENST00000301475 C12orf43Q96C57 262 aaKnown RBP11.13□□□□□ -0.63
ZNF558-201ENST00000301475 RMND5BQ96G75 393 aaPredicted RBP11.13□□□□□ -0.63
ZNF558-201ENST00000301475 MARK4Q96L34 752 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 PGLYRP2Q96PD5 576 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 SLC29A1Q99808 456 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 TMEM79Q9BSE2 394 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 ANLNQ9NQW6 1124 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 FEM1BQ9UK73 627 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 PLA2G6O60733 806 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 ADAM23O75077 832 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 LTFP02788 710 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 CCDC130P13994 396 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 METTL21CQ5VZV1 264 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 SLC9A4Q6AI14 798 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 BRSK2Q8IWQ3 736 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 LRTOMTQ8WZ04 291 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 MCRS1Q96EZ8 462 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 LHX5Q9H2C1 402 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 ANKRD31Q8N7Z5 1873 aa11.13□□□□□ -0.63
ZNF558-201ENST00000301475 MGAMO43451 1857 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 TANC1Q9C0D5 1861 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 K7ERI5 159 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 FBP2O00757 339 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 APOL1O14791 398 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 VAPBO95292 243 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 STAMBPO95630 424 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 LDHAP00338 332 aaKnown RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 ALDH2P05091 517 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 TPSB2P20231 275 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 TYK2P29597 1187 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 RXRGP48443 463 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 ZNF143P52747 638 aaPredicted RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 TPSAB1Q15661 275 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 MTX3Q5HYI7 312 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 GRAMD4Q6IC98 578 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 KRT80Q6KB66 452 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 RSBN1LQ6PCB5 846 aaPredicted RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 ILDR2Q71H61 639 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 RP9Q8TA86 221 aaKnown RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 ATP6V0A1Q93050 837 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 ABHD8Q96I13 439 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 VPS50Q96JG6 964 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 PRMT6Q96LA8 375 aaPredicted RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 MRIQ9BWK5 157 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 OSBPL11Q9BXB4 747 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 ZNF385DQ9H6B1 395 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 PRDM16Q9HAZ2 1276 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 RAVER2Q9HCJ3 691 aaKnown RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 PNPLA3Q9NST1 481 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 ASNSD1Q9NWL6 643 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 HMGXB4Q9UGU5 601 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 FER1L6Q2WGJ9 1857 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 FUOMA2VDF0 154 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 G3V2L1 256 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 H0YCG3 227 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 XPOTO43592 962 aaKnown RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 GRAP2O75791 330 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 FUCA1P04066 466 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 JUNP05412 331 aaKnown RBP11.12□□□□□ -0.63
ZNF558-201ENST00000301475 MX2P20592 715 aa11.12□□□□□ -0.63
ZNF558-201ENST00000301475 HALP42357 657 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms