RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 HGH1Q9BTY7 390 aa13.83□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MRGBPQ9NV56 204 aa13.83□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RAD54BQ9Y620 910 aa13.83□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.83□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RAD51BO15315 384 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ALOX12P18054 663 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FASP25445 335 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ADORA2AP29274 412 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NUP62P37198 522 aaPredicted RBP13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PRKAG1P54619 331 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DGKZQ13574 1117 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TAF2Q6P1X5 1199 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZFPM1Q8IX07 1006 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 BBS4Q96RK4 519 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PCDH9Q9HC56 1237 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TUBGCP4Q9UGJ1 667 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DNALI1O14645 258 aaPredicted RBP13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 LBPP18428 481 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CNTFP26441 200 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 AP5B1Q2VPB7 878 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 EID3Q8N140 333 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 POMGNT2Q8NAT1 580 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GLIS3Q8NEA6 775 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 EMID1Q96A84 441 aaPredicted RBP13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PNMA5Q96PV4 448 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 BCL2L14Q9BZR8 327 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SPG21Q9NZD8 308 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ADGRA3Q8IWK6 1321 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CHURC1-FNTBB4DL54 471 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 F8VP50 259 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TP73O15350 636 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CASP12Q6UXS9 341 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 STK32CQ86UX6 486 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 COL26A1Q96A83 441 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SMARCD1Q96GM5 515 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CDRT15Q96T59 188 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 BTBD10Q9BSF8 475 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 XPNPEP3Q9NQH7 507 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SERPINF2P08697 491 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FAM58BPP0C7Q3 252 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SHMT1P34896 483 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CDH17Q12864 832 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ELOA2Q8IYF1 753 aaPredicted RBP13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CACTIN-AS1Q8N1I8 211 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CYP4Z2PQ8N1L4 340 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FBXO30Q8TB52 745 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 METTL6Q8TCB7 284 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MRPS26Q9BYN8 205 aaKnown RBP13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 EHD4Q9H223 541 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 COG5Q9UP83 839 aa13.83□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MIPP30301 263 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 C16orf72Q14CZ0 275 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NEK10Q6ZWH5 1172 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 BHLHE22Q8NFJ8 381 aaPredicted RBP13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 APOPT1Q96IL0 206 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NDNQ99608 321 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CPNE1Q99829 537 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 IQCMA0A1B0GVH7 501 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZNF839A8K0R7 811 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MRASO14807 208 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GZMAP12544 262 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ALDH5A1P51649 535 aaPredicted RBP13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NUP107P57740 925 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SPANXN3Q5MJ09 141 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KLHL17Q6TDP4 642 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TMC3Q7Z5M5 1100 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TLK2Q86UE8 772 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 AHCYL2Q96HN2 611 aaKnown RBP13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GMCL1Q96IK5 515 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NSMCE2Q96MF7 247 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NOL6Q9H6R4 1146 aaKnown RBP13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ALG9Q9H6U8 611 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FBXO6Q9NRD1 293 aaPredicted RBP13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KPNA3O00505 521 aaPredicted RBP13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 HLA-DQA2P01906 255 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SHBGP04278 402 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PSMB4P28070 264 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ERVK-9P63128 1117 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 LLGL2Q6P1M3 1020 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KCNT2Q6UVM3 1135 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CLVS1Q8IUQ0 354 aaPredicted RBP13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 IZUMO1Q8IYV9 350 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DCLRE1BQ9H816 532 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TMEM39AQ9NV64 488 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SLC24A2Q9UI40 661 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 LYVE1Q9Y5Y7 322 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 IFNA14P01570 189 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NFKB1P19838 968 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZNF844Q08AG5 666 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PDZK1Q5T2W1 519 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SCIMPQ6UWF3 145 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 COPS5Q92905 334 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 POLR1DQ9Y2S0 133 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 HES2Q9Y543 173 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SESN1Q9Y6P5 492 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KAT5Q92993 513 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KAZALD1Q96I82 304 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SIKE1Q9BRV8 207 aa13.82□□□□□ -0.2
CHRFAM7A-201ENST00000299847 E9PCH4 1651 aa13.81□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CEP170BQ9Y4F5 1589 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms