RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TMEM265A0A087WTH1 108 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 CFAP69A5D8W1 941 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 SGK1O00141 431 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 RBL1P28749 1068 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 CARSP49589 748 aaKnown RBP25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 MLLT1Q03111 559 aaPredicted RBP25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 ADAM15Q13444 863 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 SYCE2Q6PIF2 218 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 GPR149Q86SP6 731 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 PRUNE1Q86TP1 453 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 DDX42Q86XP3 938 aaKnown RBP eCLIP25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 LGI2Q8N0V4 545 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 UMODL1-AS1Q8N2C9 162 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 CCDC33Q8N5R6 958 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 EIF1ADQ8N9N8 165 aaKnown RBP25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 ITFG1Q8TB96 612 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 LRRN4Q8WUT4 740 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 RSAD2Q8WXG1 361 aa25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 COLQQ9Y215 455 aaPredicted RBP25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 MRPS23Q9Y3D9 190 aaKnown RBP25.32■■□□□ 1.64
GTF2A1-201ENST00000298173 LEFTY2O00292 366 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 ETS1P14921 441 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 AVPR1AP37288 418 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 PRKD1Q15139 912 aaPredicted RBP25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 ANKRD54Q6NXT1 300 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 CDKL3Q8IVW4 592 aaPredicted RBP25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 CCDC89Q8N998 374 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 FAM71DQ8N9W8 422 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 TFB1MQ8WVM0 346 aaKnown RBP25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 ZSWIM3Q96MP5 696 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 LGMNQ99538 433 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 DDX50Q9BQ39 737 aaKnown RBP25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 BRD8Q9H0E9 1235 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 SMG9Q9H0W8 520 aaKnown RBP25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 NOL6Q9H6R4 1146 aaKnown RBP25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 DONSONQ9NYP3 566 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 CFAP97Q9P2B7 532 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 ZNF510Q9Y2H8 683 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 SNX24Q9Y343 169 aa25.31■■□□□ 1.64
GTF2A1-201ENST00000298173 ZSCAN5DPP0CG00 497 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 MYBL2P10244 700 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 CEBPBP17676 345 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 POU3F3P20264 500 aaPredicted RBP25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 RPL21P46778 160 aaKnown RBP25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 CUL1Q13616 776 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 BRD3Q15059 726 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 TRIP13Q15645 432 aaPredicted RBP25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 USP13Q92995 863 aaPredicted RBP25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 TRIM31Q9BZY9 425 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 DPH5Q9H2P9 285 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 PCDH9Q9HC56 1237 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 FAM114A2Q9NRY5 505 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 CCL26Q9Y258 94 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 CHD5Q8TDI0 1954 aa25.3■■□□□ 1.64
GTF2A1-201ENST00000298173 CCDC151A5D8V7 595 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 PPP1R12AO14974 1030 aaPredicted RBP25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 MX2P20592 715 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 ECHS1P30084 290 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 WEE1P30291 646 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 PPIDQ08752 370 aaKnown RBP25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 RARS2Q5T160 578 aaKnown RBP25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 CCHCR1Q8TD31 782 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 HDAC11Q96DB2 347 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 CELF6Q96J87 481 aaKnown RBP25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 PRICKLE1Q96MT3 831 aaPredicted RBP25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 SLC39A8Q9C0K1 460 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 TDP1Q9NUW8 608 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 GRHL1Q9NZI5 618 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 LSM7Q9UK45 103 aaKnown RBP25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 ZFP37Q9Y6Q3 630 aaPredicted RBP25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 TP73O15350 636 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 VAV1P15498 845 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 TCF3P15923 654 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 GARSP41250 739 aaKnown RBP25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 ZNF33AQ06730 810 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 GRIN2CQ14957 1233 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 CFAP52Q8N1V2 620 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 SH3RF2Q8TEC5 729 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 IFT81Q8WYA0 676 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 SH3BP1Q9Y3L3 701 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 MTCH2Q9Y6C9 303 aa25.29■■□□□ 1.64
GTF2A1-201ENST00000298173 E2F8A0AVK6 867 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 KCNN4O15554 427 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 IFNB1P01574 187 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 NDST2P52849 883 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 NRLP54845 237 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 RPS24P62847 133 aaKnown RBP25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 CBX2Q14781 532 aaPredicted RBP25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 RABGAP1LQ5R372 815 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 TFAP2DQ7Z6R9 452 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 RIN3Q8TB24 985 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 HTR3CQ8WXA8 447 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 TSGA13Q96PP4 275 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 CLEC1BQ9P126 229 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 ASIC3Q9UHC3 531 aa25.28■■□□□ 1.64
GTF2A1-201ENST00000298173 TRDMT1O14717 391 aaKnown RBP25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 HOXB8P17481 243 aaPredicted RBP25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 RPL22P35268 128 aaKnown RBP25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 MAPKAPK2P49137 400 aa25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 SGSHP51688 502 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms