RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 UBP1Q9NZI7 540 aa15.06■□□□□ 0
CCNF-201ENST00000293968 A0A0A0MRY4 1105 aa15.06■□□□□ 0
CCNF-201ENST00000293968 GCATO75600 419 aa15.06■□□□□ 0
CCNF-201ENST00000293968 TPSB2P20231 275 aa15.06■□□□□ 0
CCNF-201ENST00000293968 TPSAB1Q15661 275 aa15.06■□□□□ 0
CCNF-201ENST00000293968 UGT2A3Q6UWM9 527 aa15.06■□□□□ 0
CCNF-201ENST00000293968 AMIGO2Q86SJ2 522 aa15.06■□□□□ 0
CCNF-201ENST00000293968 SPATA13Q96N96 652 aa15.06■□□□□ 0
CCNF-201ENST00000293968 KCTD15Q96SI1 283 aaPredicted RBP15.06■□□□□ 0
CCNF-201ENST00000293968 TRPV6Q9H1D0 765 aa15.06■□□□□ 0
CCNF-201ENST00000293968 MKS1Q9NXB0 559 aa15.06■□□□□ 0
CCNF-201ENST00000293968 DTLQ9NZJ0 730 aa15.06■□□□□ 0
CCNF-201ENST00000293968 HACL1Q9UJ83 578 aa15.06■□□□□ 0
CCNF-201ENST00000293968 GNEQ9Y223 722 aaKnown RBP15.06■□□□□ 0
CCNF-201ENST00000293968 HCRTO43612 131 aa15.06■□□□□ 0
CCNF-201ENST00000293968 ENDOD1O94919 500 aa15.06■□□□□ 0
CCNF-201ENST00000293968 PGK2P07205 417 aa15.06■□□□□ 0
CCNF-201ENST00000293968 ZFXP17010 805 aaPredicted RBP15.06■□□□□ 0
CCNF-201ENST00000293968 Q3C1V9 767 aa15.06■□□□□ 0
CCNF-201ENST00000293968 GLRA4Q5JXX5 417 aa15.06■□□□□ 0
CCNF-201ENST00000293968 NAPRTQ6XQN6 538 aa15.06■□□□□ 0
CCNF-201ENST00000293968 LCA5Q86VQ0 697 aa15.06■□□□□ 0
CCNF-201ENST00000293968 DSELQ8IZU8 1212 aa15.06■□□□□ 0
CCNF-201ENST00000293968 AGBL3Q8NEM8 1001 aa15.06■□□□□ 0
CCNF-201ENST00000293968 MIPOL1Q8TD10 442 aa15.06■□□□□ 0
CCNF-201ENST00000293968 ACMSDQ8TDX5 336 aa15.06■□□□□ 0
CCNF-201ENST00000293968 CERS2Q96G23 380 aa15.06■□□□□ 0
CCNF-201ENST00000293968 STN1Q9H668 368 aaKnown RBP15.06■□□□□ 0
CCNF-201ENST00000293968 HOXC10Q9NYD6 342 aa15.06■□□□□ 0
CCNF-201ENST00000293968 UBR3Q6ZT12 1888 aa15.05■□□□□ 0
CCNF-201ENST00000293968 A0A087WZ62 844 aa15.05■□□□□ 0
CCNF-201ENST00000293968 SPRP35270 261 aaPredicted RBP15.05■□□□□ 0
CCNF-201ENST00000293968 DCAF15Q66K64 600 aa15.05■□□□□ 0
CCNF-201ENST00000293968 SPATA6LQ8N4H0 392 aa15.05■□□□□ 0
CCNF-201ENST00000293968 COPS5Q92905 334 aa15.05■□□□□ 0
CCNF-201ENST00000293968 TBCBQ99426 244 aa15.05■□□□□ 0
CCNF-201ENST00000293968 FDXACB1Q9BRP7 624 aaPredicted RBP15.05■□□□□ 0
CCNF-201ENST00000293968 UBAP1Q9NZ09 502 aa15.05■□□□□ 0
CCNF-201ENST00000293968 PHGDHO43175 533 aaKnown RBP15.05■□□□□ -0
CCNF-201ENST00000293968 LTFP02788 710 aa15.05■□□□□ -0
CCNF-201ENST00000293968 PTPRAP18433 802 aa15.05■□□□□ -0
CCNF-201ENST00000293968 RBP5P82980 135 aa15.05■□□□□ -0
CCNF-201ENST00000293968 TARBP2Q15633 366 aaKnown RBP15.05■□□□□ -0
CCNF-201ENST00000293968 LAYNQ6UX15 382 aa15.05■□□□□ -0
CCNF-201ENST00000293968 TSHZ1Q6ZSZ6 1077 aa15.05■□□□□ -0
CCNF-201ENST00000293968 MRPL45Q9BRJ2 306 aaKnown RBP15.05■□□□□ -0
CCNF-201ENST00000293968 CAAP1Q9H8G2 361 aa15.05■□□□□ -0
CCNF-201ENST00000293968 NDUFA13Q9P0J0 144 aa15.05■□□□□ -0
CCNF-201ENST00000293968 TRIM13O60858 407 aa15.05■□□□□ -0
CCNF-201ENST00000293968 VTNP04004 478 aa15.05■□□□□ -0
CCNF-201ENST00000293968 ASLP04424 464 aa15.05■□□□□ -0
CCNF-201ENST00000293968 FAM58BPP0C7Q3 252 aa15.05■□□□□ -0
CCNF-201ENST00000293968 L1CAMP32004 1257 aa15.05■□□□□ -0
CCNF-201ENST00000293968 MTTPP55157 894 aa15.05■□□□□ -0
CCNF-201ENST00000293968 TTLL12Q14166 644 aaPredicted RBP15.05■□□□□ -0
CCNF-201ENST00000293968 SEL1L3Q68CR1 1132 aa15.05■□□□□ -0
CCNF-201ENST00000293968 KRT80Q6KB66 452 aa15.05■□□□□ -0
CCNF-201ENST00000293968 PGM2L1Q6PCE3 622 aa15.05■□□□□ -0
CCNF-201ENST00000293968 ILDR2Q71H61 639 aa15.05■□□□□ -0
CCNF-201ENST00000293968 NLRP7Q8WX94 980 aa15.05■□□□□ -0
CCNF-201ENST00000293968 RTKNQ9BST9 563 aa15.05■□□□□ -0
CCNF-201ENST00000293968 GBA2Q9HCG7 927 aaPredicted RBP15.05■□□□□ -0
CCNF-201ENST00000293968 ZDHHC7Q9NXF8 308 aa15.05■□□□□ -0
CCNF-201ENST00000293968 MFSD11O43934 449 aa15.04■□□□□ -0
CCNF-201ENST00000293968 TMCC1O94876 653 aa15.04■□□□□ -0
CCNF-201ENST00000293968 PIGNO95427 931 aa15.04■□□□□ -0
CCNF-201ENST00000293968 GSRP00390 522 aa15.04■□□□□ -0
CCNF-201ENST00000293968 NAGLUP54802 743 aa15.04■□□□□ -0
CCNF-201ENST00000293968 XIAPP98170 497 aa15.04■□□□□ -0
CCNF-201ENST00000293968 CDK18Q07002 472 aa15.04■□□□□ -0
CCNF-201ENST00000293968 TTC30AQ86WT1 665 aa15.04■□□□□ -0
CCNF-201ENST00000293968 PCDH20Q8N6Y1 951 aaKnown RBP15.04■□□□□ -0
CCNF-201ENST00000293968 P2RY11Q96G91 374 aa15.04■□□□□ -0
CCNF-201ENST00000293968 NPAS2Q99743 824 aa15.04■□□□□ -0
CCNF-201ENST00000293968 CCT7Q99832 543 aa15.04■□□□□ -0
CCNF-201ENST00000293968 CYP3A43Q9HB55 503 aa15.04■□□□□ -0
CCNF-201ENST00000293968 IARS2Q9NSE4 1012 aaKnown RBP15.04■□□□□ -0
CCNF-201ENST00000293968 BCAP29Q9UHQ4 241 aa15.04■□□□□ -0
CCNF-201ENST00000293968 ANKRD31Q8N7Z5 1873 aa15.04■□□□□ -0
CCNF-201ENST00000293968 H3BNX3 289 aa15.04■□□□□ -0
CCNF-201ENST00000293968 DNAJA2O60884 412 aa15.04■□□□□ -0
CCNF-201ENST00000293968 CCDC130P13994 396 aa15.04■□□□□ -0
CCNF-201ENST00000293968 SULT1E1P49888 294 aa15.04■□□□□ -0
CCNF-201ENST00000293968 SERPINB8P50452 374 aa15.04■□□□□ -0
CCNF-201ENST00000293968 LCLAT1Q6UWP7 414 aa15.04■□□□□ -0
CCNF-201ENST00000293968 TIFABQ6ZNK6 161 aa15.04■□□□□ -0
CCNF-201ENST00000293968 KBTBD6Q86V97 674 aa15.04■□□□□ -0
CCNF-201ENST00000293968 TEPSINQ96N21 525 aa15.04■□□□□ -0
CCNF-201ENST00000293968 WDR41Q9HAD4 459 aa15.04■□□□□ -0
CCNF-201ENST00000293968 NMRAL1Q9HBL8 299 aa15.04■□□□□ -0
CCNF-201ENST00000293968 BFARQ9NZS9 450 aa15.04■□□□□ -0
CCNF-201ENST00000293968 HES2Q9Y543 173 aa15.04■□□□□ -0
CCNF-201ENST00000293968 TNFAIP8O95379 198 aa15.04■□□□□ -0
CCNF-201ENST00000293968 MYL4P12829 197 aa15.04■□□□□ -0
CCNF-201ENST00000293968 PRAMEP78395 509 aa15.04■□□□□ -0
CCNF-201ENST00000293968 SEMA5AQ13591 1074 aa15.04■□□□□ -0
CCNF-201ENST00000293968 DCAF6Q58WW2 860 aa15.04■□□□□ -0
CCNF-201ENST00000293968 C4orf22Q6V702 233 aa15.04■□□□□ -0
CCNF-201ENST00000293968 QKIQ96PU8 341 aaKnown RBP eCLIP15.04■□□□□ -0
CCNF-201ENST00000293968 HAPLN3Q96S86 360 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms