RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 FAM78AQ5JUQ0 283 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 Q7L0L9 218 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 CPXM2Q8N436 756 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 LZTR1Q8N653 840 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 SMARCD2Q92925 531 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 NKD2Q969F2 451 aaPredicted RBP19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 PRICKLE1Q96MT3 831 aaPredicted RBP19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 RUNDC3BQ96NL0 473 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 TMEM248Q9NWD8 314 aa19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 ZFP37Q9Y6Q3 630 aaPredicted RBP19.45■□□□□ 0.7
PDLIM3-202ENST00000284770 GFRA2O00451 464 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 TRDMT1O14717 391 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 MCF2LO15068 1137 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 CNTN5O94779 1100 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 VCPP55072 806 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 EIF3EP60228 445 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 DR1Q01658 176 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 CCDC105Q8IYK2 499 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 NPWQ8N729 165 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 MYLIPQ8WY64 445 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 SLCO2A1Q92959 643 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 OLFM3Q96PB7 478 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 HINFPQ9BQA5 517 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 KLC2Q9H0B6 622 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 TRPV4Q9HBA0 871 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 FEZ2Q9UHY8 353 aaPredicted RBP19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 DRG1Q9Y295 367 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 RAD54BQ9Y620 910 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 HELZP42694 1942 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 ZSCAN5CA6NGD5 496 aaPredicted RBP19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 KCNJ1P48048 391 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 RPS24P62847 133 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 OASLQ15646 514 aaKnown RBP19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 TTC39BQ5VTQ0 682 aaPredicted RBP19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 CFAP52Q8N1V2 620 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 KIAA1958Q8N8K9 716 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 ATL2Q8NHH9 583 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 GDF3Q9NR23 364 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 NDFIP2Q9NV92 336 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 TBC1D14Q9P2M4 693 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 ZNF212Q9UDV6 495 aa19.44■□□□□ 0.7
PDLIM3-202ENST00000284770 CCDC151A5D8V7 595 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 TSPAN3O60637 253 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 MAP3K6O95382 1288 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 ITGAVP06756 1048 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 RBP3P10745 1247 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 CDH4P55283 916 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 XRCC4Q13426 336 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 TFAP2DQ7Z6R9 452 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 ZC3H18Q86VM9 953 aaKnown RBP19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 CIR1Q86X95 450 aaPredicted RBP19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 TMA16Q96EY4 203 aaKnown RBP19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 NECTIN4Q96NY8 510 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 CD207Q9UJ71 328 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 ZNF148Q9UQR1 794 aa19.43■□□□□ 0.7
PDLIM3-202ENST00000284770 FAM187AA6NFU0 413 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 NCAM2O15394 837 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 CLDN11O75508 207 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 MCM3P25205 808 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 MAPKAPK2P49137 400 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 SGSHP51688 502 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 GUCY2DQ02846 1103 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 BRD3Q15059 726 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 PDK1Q15118 436 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 CHST9Q7L1S5 443 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 JAMLQ86YT9 394 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 UMODL1-AS1Q8N2C9 162 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 TDRD5Q8NAT2 981 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 SEC14L1Q92503 715 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 LRRC3BQ96PB8 259 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 MYADMQ96S97 322 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 POMKQ9H5K3 350 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 EPB41L5Q9HCM4 733 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 H7C0C1 242 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 TNFRSF8P28908 595 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 VIPR2P41587 438 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 ATP5OP48047 213 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 CLCN6P51797 869 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 LMNB2Q03252 620 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 CCDC85BQ15834 202 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 KCTD19Q17RG1 926 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 HABP4Q5JVS0 413 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 AFMIDQ63HM1 303 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 TP53INP2Q8IXH6 220 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 CCDC33Q8N5R6 958 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 NETO2Q8NC67 525 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 HJURPQ8NCD3 748 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 NUP210Q8TEM1 1887 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 GRK7Q8WTQ7 553 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 SUSD6Q92537 303 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 OTUB2Q96DC9 234 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 RSPRY1Q96DX4 576 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 CELF6Q96J87 481 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 GUCD1Q96NT3 240 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 TRIM51Q9BSJ1 452 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 OBP2AQ9NY56 170 aa19.42■□□□□ 0.7
PDLIM3-202ENST00000284770 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 A0A1B0GVM2 712 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 ESYT3A0FGR9 886 aa19.41■□□□□ 0.7
PDLIM3-202ENST00000284770 TYW5A2RUC4 315 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms