RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 RPL17P18621 184 aaKnown RBP6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 SERPINB3P29508 390 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 CCL23P55773 120 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 DEFB128Q7Z7B8 93 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 PARP9Q8IXQ6 854 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 SH3TC2Q8TF17 1288 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 GIPC2Q8TF65 315 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 SCLYQ96I15 445 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 FCRL2Q96LA5 508 aaPredicted RBP6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 KLHL5Q96PQ7 755 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 TRIM55Q9BYV6 548 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 PPP1R12CQ9BZL4 782 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 NACA2Q9H009 215 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 C20orf96Q9NUD7 363 aaPredicted RBP6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 ZFP69BQ9UJL9 534 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 FBXW11Q9UKB1 542 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 Q9Y3F1 56 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 USP3Q9Y6I4 520 aa6.2□□□□□ -1.42
TNFSF4-201ENST00000281834 BUD23O43709 281 aaKnown RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 KPNA6O60684 536 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 OPHN1O60890 802 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 FBXO21O94952 628 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 CKBP12277 381 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 CHRNA4P43681 627 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 TUBP50607 506 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 ARFIP2P53365 341 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 BST1Q10588 318 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 CTXN3Q4LDR2 81 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 ATPAF2Q8N5M1 289 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 PCSK9Q8NBP7 692 aaKnown RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 DBF4BQ8NFT6 615 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 RXFP1Q9HBX9 757 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 IARS2Q9NSE4 1012 aaKnown RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 SCN4AP35499 1836 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 C5orf42Q9H799 3197 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 TRDMT1O14717 391 aaKnown RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 DCLK1O15075 740 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 DGKIO75912 1065 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 POLBP06746 335 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 FDFT1P37268 417 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 USP46P62068 366 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 GRIK3Q13003 919 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 SEMA5AQ13591 1074 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 MBTPS1Q14703 1052 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 SNCBQ16143 134 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 PSMD5Q16401 504 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 N4BP2L1Q5TBK1 243 aaPredicted RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 TMCO2Q7Z6W1 182 aaPredicted RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 STRA8Q7Z7C7 330 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 RTN4RL1Q86UN2 441 aaPredicted RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 ALYREFQ86V81 257 aaKnown RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 KCNV2Q8TDN2 545 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 OLFM3Q96PB7 478 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 SLC2A13Q96QE2 648 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 TMEM120AQ9BXJ8 343 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 CHST12Q9NRB3 414 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 TBC1D13Q9NVG8 400 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 PPARGC1AQ9UBK2 798 aaKnown RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 SLC39A10Q9ULF5 831 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 LRFN2Q9ULH4 789 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 USH1CQ9Y6N9 552 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 SMAPO00193 183 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 PHGDHO43175 533 aaKnown RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 RPSAP08865 295 aaKnown RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 RPL9P32969 192 aaKnown RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 ALDH18A1P54886 795 aaKnown RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 SESN3P58005 492 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 ELF3P78545 371 aaPredicted RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 KDSRQ06136 332 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 XRCC4Q13426 336 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 DPYSQ14117 519 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 PARP6Q2NL67 630 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 CLLU1OSQ5K130 101 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 C10orf120Q5SQS8 335 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 CCDC91Q7Z6B0 441 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 C14orf80Q86SX3 495 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 RNF135Q8IUD6 432 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 CNPY4Q8N129 248 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 SMC1BQ8NDV3 1235 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 MZB1Q8WU39 189 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 KCTD13Q8WZ19 329 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 E2F7Q96AV8 911 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 SGF29Q96ES7 293 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 CAPNS2Q96L46 248 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 FCRL3Q96P31 734 aaPredicted RBP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 ACBD6Q9BR61 282 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 FSD1LQ9BXM9 530 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 RBM22Q9NW64 420 aaKnown RBP eCLIP6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 GMIPQ9P107 970 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 FIS1Q9Y3D6 152 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 PCDHA11Q9Y5I1 949 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 TLL2Q9Y6L7 1015 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 MYO9BQ13459 2157 aa6.19□□□□□ -1.42
TNFSF4-201ENST00000281834 HMX2A2RU54 273 aa6.18□□□□□ -1.42
TNFSF4-201ENST00000281834 HHLA1C9JL84 531 aa6.18□□□□□ -1.42
TNFSF4-201ENST00000281834 SPAG6O75602 509 aa6.18□□□□□ -1.42
TNFSF4-201ENST00000281834 RFPL1O75677 317 aa6.18□□□□□ -1.42
TNFSF4-201ENST00000281834 PIRTP0C851 137 aa6.18□□□□□ -1.42
TNFSF4-201ENST00000281834 CCR1P32246 355 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms