RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ABATP80404 500 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 RHAGQ02094 409 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 BST2Q10589 180 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 CCNIQ14094 377 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF268Q14587 947 aaPredicted RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 FAM220AQ7Z4H9 259 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ABRAQ8N0Z2 381 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 METTL6Q8TCB7 284 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 KBTBD4Q9NVX7 518 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 DUSP10Q9Y6W6 482 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 RPLP2P05387 115 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 S100A6P06703 90 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 RAB2AP61019 212 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 MRPS22P82650 360 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 HHIPL2Q6UWX4 724 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 MAGEB10Q96LZ2 347 aaPredicted RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 NLNQ9BYT8 704 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 KCNH7Q9NS40 1196 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 RAD18Q9NS91 495 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 WBP11Q9Y2W2 641 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 DCXO43602 365 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ERVK-10P10266 1014 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 TCF4P15884 667 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 CD44P16070 742 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 PTDSS1P48651 473 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 MTMR2Q13614 643 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ILDR2Q71H61 639 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 PROSER1Q86XN7 944 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 STX12Q86Y82 276 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 OTUD5Q96G74 571 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 RUSC1Q9BVN2 902 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 EPB41L1Q9H4G0 881 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ABCB10Q9NRK6 738 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ERGIC3Q9Y282 383 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 TBC1D30Q9Y2I9 924 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 R3HDM2Q9Y2K5 976 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 PXDNLA1KZ92 1463 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 IRGMA1A4Y4 181 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 KBTBD13C9JR72 458 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 OR6A2O95222 327 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 RHOCP08134 193 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 AP1S2P56377 157 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ACAP1Q15027 740 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF484Q5JVG2 852 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ERMARDQ5T6L9 678 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 HERC6Q8IVU3 1022 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 POU5F2Q8N7G0 328 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ZCCHC2Q9C0B9 1178 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 SEMA6AQ9H2E6 1030 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 GPATCH2LQ9NWQ4 482 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 AKAP7Q9P0M2 348 aaPredicted RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF222Q9UK12 451 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 HBS1LQ9Y450 684 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 GMPPBQ9Y5P6 360 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 IFRD1O00458 451 aaPredicted RBP8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 STAU1O95793 577 aaKnown RBP8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 ABHD2P08910 425 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 UQCRBP14927 111 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 RASA1P20936 1047 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 ACO1P21399 889 aaKnown RBP8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 SLC15A2Q16348 729 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 PYDC2Q56P42 97 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 ARCQ7LC44 396 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 MCOLN2Q8IZK6 566 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 MREGQ8N565 214 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 SLC9A7Q96T83 725 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 PIF1Q9H611 641 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 TIMMDC1Q9NPL8 285 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 UBP1Q9NZI7 540 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 POLR1DQ9Y2S0 133 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 SNX8Q9Y5X2 465 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 NEO1Q92859 1461 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 SMIM22K7EJ46 135 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 MAP2K7O14733 419 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 CTDNEP1O95476 244 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 ANPEPP15144 967 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 AKR1D1P51857 326 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 GMFBP60983 142 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 SCARF1Q14162 830 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 TAF8Q7Z7C8 310 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 SIX5Q8N196 739 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 OR52L1Q8NGH7 329 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 RP9Q8TA86 221 aaKnown RBP8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 MCOLN3Q8TDD5 553 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 TCF12Q99081 682 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 MNTQ99583 582 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 CLK4Q9HAZ1 481 aaKnown RBP8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 PRKAG3Q9UGI9 489 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 LEF1Q9UJU2 399 aaPredicted RBP8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF112Q9UJU3 913 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 TMEM94Q12767 1356 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 LAMC1P11047 1609 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 LOC100506127A0A0U1RQW1 187 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 SERPINF2P08697 491 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 LHX1P48742 406 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 DGCR6Q14129 220 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 MFSD7Q6UXD7 560 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 ATG14Q6ZNE5 492 aa8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 CXXC5Q7LFL8 322 aaKnown RBP8.86□□□□□ -0.99
SCUBE3-201ENST00000274938 PDPRQ8NCN5 879 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms