RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ZBBXA8MT70 800 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 BTBD19C9JJ37 291 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 MATN2O00339 956 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 LRCH4O75427 683 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 ITGB5P18084 799 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 PCYT1AP49585 367 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 CCDC142Q17RM4 750 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 RNF19BQ6ZMZ0 732 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 SLC15A4Q8N697 577 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 UBR7Q8N806 425 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 SLC39A3Q9BRY0 314 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 MTG1Q9BT17 334 aaPredicted RBP13.13□□□□□ -0.31
HERC6-202ENST00000273960 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 WDR70Q9NW82 654 aa13.13□□□□□ -0.31
HERC6-202ENST00000273960 AP1G1O43747 822 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 S100BP04271 92 aaPredicted RBP13.12□□□□□ -0.31
HERC6-202ENST00000273960 MAGP20916 626 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 BMXP51813 675 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 NME5P56597 212 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 OLIG2Q13516 323 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 HADHQ16836 314 aaKnown RBP13.12□□□□□ -0.31
HERC6-202ENST00000273960 FSCBQ5H9T9 825 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
HERC6-202ENST00000273960 ATG4CQ96DT6 458 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 CEP170P1Q96L14 293 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 TAAR1Q96RJ0 339 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 CAMKK2Q96RR4 588 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 SORT1Q99523 831 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 NACA2Q9H009 215 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 RPAP3Q9H6T3 665 aaPredicted RBP13.12□□□□□ -0.31
HERC6-202ENST00000273960 POLE4Q9NR33 117 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 EXOC7Q9UPT5 735 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 GPC6Q9Y625 555 aaPredicted RBP13.12□□□□□ -0.31
HERC6-202ENST00000273960 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 RNF103-CHMP3A0A140T963 221 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 ERVK-10P10266 1014 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 TCEA1P23193 301 aaKnown RBP13.12□□□□□ -0.31
HERC6-202ENST00000273960 RAP1GAPP47736 663 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 ABCE1P61221 599 aaKnown RBP13.12□□□□□ -0.31
HERC6-202ENST00000273960 C15orf59Q2T9L4 293 aaPredicted RBP13.12□□□□□ -0.31
HERC6-202ENST00000273960 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 FAM91A1Q658Y4 838 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 BTLAQ7Z6A9 289 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 ZC3H7AQ8IWR0 971 aaKnown RBP13.12□□□□□ -0.31
HERC6-202ENST00000273960 SPATA6LQ8N4H0 392 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 TMCO5AQ8N6Q1 288 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 ARFGAP1Q8N6T3 406 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 TDRD5Q8NAT2 981 aaKnown RBP13.12□□□□□ -0.31
HERC6-202ENST00000273960 VPS50Q96JG6 964 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 SEPT10Q9P0V9 454 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 EMCNQ9ULC0 261 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 TAF1LQ8IZX4 1826 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 ARFGEF1Q9Y6D6 1849 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 SERPINE1P05121 402 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 ME2P23368 584 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 CD151P48509 253 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 GCNT1Q02742 428 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 DNASE1L3Q13609 305 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 MTMR1Q13613 665 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 PTK2BQ14289 1009 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 PCLAFQ15004 111 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 LRRC8EQ6NSJ5 796 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 NAPRTQ6XQN6 538 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 TMEM161BQ8NDZ6 487 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 SGF29Q96ES7 293 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 RANBP9Q96S59 729 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 STRA6Q9BX79 667 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 MAGEB5Q9BZ81 275 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 POPDC2Q9HBU9 364 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 GPRC5DQ9NZD1 345 aa13.12□□□□□ -0.31
HERC6-202ENST00000273960 C9JVG2 144 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 E7ESA3 106 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 MMP8P22894 467 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 MIPP30301 263 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 PPARGP37231 505 aaPredicted RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 SPIDRQ14159 915 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 THOC7Q6I9Y2 204 aaKnown RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 GK5Q6ZS86 529 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 USP37Q86T82 979 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 CDR2LQ86X02 465 aaPredicted RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 LZTR1Q8N653 840 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 GMCL1P1Q8NEA9 526 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 ADCY4Q8NFM4 1077 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 BPIFB6Q8NFQ5 453 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 TAMM41Q96BW9 452 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 TRIM8Q9BZR9 551 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 MRPL46Q9H2W6 279 aaKnown RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 OLAHQ9NV23 265 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 POU2F3Q9UKI9 436 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 AP4S1Q9Y587 144 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 B4GAT1O43505 415 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 CST3P01034 146 aaPredicted RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 KRT19P08727 400 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 NCAM1P13591 858 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 GTF2BQ00403 316 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms