RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PXNP49023 591 aaPredicted RBP10.27□□□□□ -0.77
LRTM1-201ENST00000273286 SHC2P98077 582 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 FANCCQ00597 558 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 RESTQ13127 1097 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 PREPLQ4J6C6 727 aaPredicted RBP10.27□□□□□ -0.77
LRTM1-201ENST00000273286 ZNF394Q53GI3 561 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 STPG1Q5TH74 334 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 SDHAF4Q5VUM1 108 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 CRTC3Q6UUV7 619 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 ARL14EPQ8N8R7 260 aaPredicted RBP10.27□□□□□ -0.77
LRTM1-201ENST00000273286 TSTD1Q8NFU3 115 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 NOC3LQ8WTT2 800 aaKnown RBP10.27□□□□□ -0.77
LRTM1-201ENST00000273286 C8orf48Q96LL4 319 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 CLIC6Q96NY7 704 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 SLITRK1Q96PX8 696 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 FNBP1Q96RU3 617 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 CYP2S1Q96SQ9 504 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 MMS19Q96T76 1030 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 CDADC1Q9BWV3 514 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 ELOVL4Q9GZR5 314 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 IKZF4Q9H2S9 585 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 PCIF1Q9H4Z3 704 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 MAGEF1Q9HAY2 307 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 CGNQ9P2M7 1197 aaKnown RBP10.27□□□□□ -0.77
LRTM1-201ENST00000273286 PCDHGB7Q9Y5F8 929 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 WNT6Q9Y6F9 365 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 UBE4BO95155 1302 aa10.27□□□□□ -0.77
LRTM1-201ENST00000273286 MAP1BP46821 2468 aaKnown RBP10.27□□□□□ -0.77
LRTM1-201ENST00000273286 FADS2P1A8MWK0 482 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 ALDH1A2O94788 518 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 ZNF205O95201 554 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 CDR1P51861 262 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 DGKEP52429 567 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 SLC7A9P82251 487 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 MRPS21P82921 87 aaKnown RBP10.26□□□□□ -0.77
LRTM1-201ENST00000273286 SF3A2Q15428 464 aaKnown RBP10.26□□□□□ -0.77
LRTM1-201ENST00000273286 ST3GAL2Q16842 350 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 DAB2IPQ5VWQ8 1189 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 LMBRD2Q68DH5 695 aaPredicted RBP10.26□□□□□ -0.77
LRTM1-201ENST00000273286 CNNM4Q6P4Q7 775 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 RASSF3Q86WH2 238 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 MYCBPAPQ8TBZ2 947 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 KBTBD7Q8WVZ9 684 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 OVCA2Q8WZ82 227 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 MYLPFQ96A32 169 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 OTUB2Q96DC9 234 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 CHAMP1Q96JM3 812 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 CNOT6LQ96LI5 555 aaKnown RBP10.26□□□□□ -0.77
LRTM1-201ENST00000273286 DHRS1Q96LJ7 313 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 FERD3LQ96RJ6 166 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 LSM14BQ9BX40 385 aaKnown RBP10.26□□□□□ -0.77
LRTM1-201ENST00000273286 SNX25Q9H3E2 840 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 FBRSL1Q9HCM7 1045 aaKnown RBP10.26□□□□□ -0.77
LRTM1-201ENST00000273286 ERVK13-1Q9NX77 482 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 HSPBP1Q9NZL4 362 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 TBC1D14Q9P2M4 693 aa10.26□□□□□ -0.77
LRTM1-201ENST00000273286 CNOT6Q9ULM6 557 aaKnown RBP10.26□□□□□ -0.77
LRTM1-201ENST00000273286 ATP8B3O60423 1300 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 BCLAF3A2AJT9 711 aaKnown RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 C2orf78A6NCI8 922 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 PPP6R2O75170 966 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 RTN3O95197 1032 aaPredicted RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 CAVIN2O95810 425 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 OLFM2O95897 454 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 IMPDH2P12268 514 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 PNLIPP16233 465 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 TNNI1P19237 187 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 BDNFP23560 247 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 PMLP29590 882 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 ATICP31939 592 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 GNL1P36915 607 aaPredicted RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 NASPP49321 788 aaPredicted RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 TNNC1P63316 161 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 SRSF3P84103 164 aaKnown RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 CEBPZQ03701 1054 aaKnown RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 BYSLQ13895 437 aaKnown RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 SNRNP35Q16560 246 aaKnown RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 TDRD10Q5VZ19 366 aaKnown RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 TRAPPC11Q7Z392 1133 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 OSTM1Q86WC4 334 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 CBWD2Q8IUF1 395 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 IQUBQ8NA54 791 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 STKLD1Q8NE28 680 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 OR5B17Q8NGF7 314 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 USP33Q8TEY7 942 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 SYAP1Q96A49 352 aaPredicted RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 PCED1BQ96HM7 432 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 USP28Q96RU2 1077 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 SLC22A12Q96S37 553 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 TRIM9Q9C026 710 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 PRR13Q9NZ81 148 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 MMP17Q9ULZ9 603 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 ATG2BQ96BY7 2078 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 ANAPC1Q9H1A4 1944 aa10.25□□□□□ -0.77
LRTM1-201ENST00000273286 HELZP42694 1942 aaKnown RBP10.25□□□□□ -0.77
LRTM1-201ENST00000273286 ZNF840PA6NDX5 716 aa10.24□□□□□ -0.77
LRTM1-201ENST00000273286 LEFTY2O00292 366 aa10.24□□□□□ -0.77
LRTM1-201ENST00000273286 OAS1P00973 400 aaKnown RBP10.24□□□□□ -0.77
LRTM1-201ENST00000273286 TRIM21P19474 475 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms