RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 PCDHGB2Q9Y5G2 931 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 M0QYV0 167 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 CBX4O00257 560 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 PMM2O15305 246 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 STX10O60499 249 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 SIN3BO75182 1162 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 CER1O95813 267 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 IGLV3-25P01717 112 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 LTFP02788 710 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 PAEPP09466 180 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 ACADMP11310 421 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 CSKP41240 450 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 GPD2P43304 727 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 GRIA4P48058 902 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 NUMBP49757 651 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 AFF3P51826 1226 aaKnown RBP9.29□□□□□ -0.92
TPM3-201ENST00000271850 IL9RQ01113 521 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 KCNJ12Q14500 433 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 CNGA2Q16280 664 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 PRAMEF14Q5SWL7 426 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 MPP7Q5T2T1 576 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 C9orf64Q5T6V5 341 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 SYPL2Q5VXT5 272 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 ISM2Q6H9L7 571 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 TTI2Q6NXR4 508 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 RRAGAQ7L523 313 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 TAC4Q86UU9 113 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 SIX6OS1Q8N1H7 587 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 CFAP52Q8N1V2 620 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 AADATQ8N5Z0 425 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 FIBINQ8TAL6 211 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 SETD7Q8WTS6 366 aaKnown RBP9.29□□□□□ -0.92
TPM3-201ENST00000271850 RNF139Q8WU17 664 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 IRGQQ8WZA9 623 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 CCDC47Q96A33 483 aaKnown RBP9.29□□□□□ -0.92
TPM3-201ENST00000271850 CRELD1Q96HD1 420 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 SLC6A18Q96N87 628 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 BBC3Q96PG8 261 aaPredicted RBP9.29□□□□□ -0.92
TPM3-201ENST00000271850 GSDMAQ96QA5 445 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 FAM129BQ96TA1 746 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 BTBD1Q9H0C5 482 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 PCED1AQ9H1Q7 454 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 PABPC3Q9H361 631 aaKnown RBP9.29□□□□□ -0.92
TPM3-201ENST00000271850 CAAP1Q9H8G2 361 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 HESX1Q9UBX0 185 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 ARMCX3Q9UH62 379 aaPredicted RBP9.29□□□□□ -0.92
TPM3-201ENST00000271850 MAN1B1Q9UKM7 699 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 RAXQ9Y2V3 346 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 PCDHB4Q9Y5E5 795 aa9.29□□□□□ -0.92
TPM3-201ENST00000271850 ARID1BQ8NFD5 2236 aaPredicted RBP9.28□□□□□ -0.92
TPM3-201ENST00000271850 A0A1W2PP55 124 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 A0A1W2PR77 199 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 FAM149AA5PLN7 773 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 TTC34A8MYJ7 566 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 MID1O15344 667 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 FLRT2O43155 660 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 PAPSS1O43252 624 aaPredicted RBP9.28□□□□□ -0.92
TPM3-201ENST00000271850 FSBPO95073 299 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 VAV1P15498 845 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 TBXAS1P24557 533 aaPredicted RBP9.28□□□□□ -0.92
TPM3-201ENST00000271850 CD27P26842 260 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 STK19P49842 368 aaPredicted RBP9.28□□□□□ -0.92
TPM3-201ENST00000271850 IRAK1P51617 712 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 GALCP54803 685 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 TBX4P57082 545 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 SLC8A3P57103 927 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 ZNF445P59923 1031 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 APBA1Q02410 837 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 LRRC63Q05C16 580 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 ARID5BQ14865 1188 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 TAF5Q15542 800 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 COL28A1Q2UY09 1125 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 HNRNPA1L2Q32P51 320 aaKnown RBP9.28□□□□□ -0.92
TPM3-201ENST00000271850 SOWAHCQ53LP3 525 aaPredicted RBP9.28□□□□□ -0.92
TPM3-201ENST00000271850 DCAF6Q58WW2 860 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 MS4A13Q5J8X5 152 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 PITRM1Q5JRX3 1037 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 ARTNQ5T4W7 220 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 DENND1BQ6P3S1 775 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 IL27RAQ6UWB1 636 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 MFN1Q8IWA4 741 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 DHX40Q8IX18 779 aaKnown RBP9.28□□□□□ -0.92
TPM3-201ENST00000271850 APCDD1Q8J025 514 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 OR52K2Q8NGK3 314 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 SNIP1Q8TAD8 396 aaKnown RBP9.28□□□□□ -0.92
TPM3-201ENST00000271850 RHBDD1Q8TEB9 315 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 PTPRN2Q92932 1015 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 AZIN2Q96A70 460 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 HSFY1Q96LI6 401 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 PRMT1Q99873 361 aaKnown RBP9.28□□□□□ -0.92
TPM3-201ENST00000271850 MIS12Q9H081 205 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 NEUROG2Q9H2A3 272 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 STIM2Q9P246 746 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 SLCO3A1Q9UIG8 710 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 CNTN6Q9UQ52 1028 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 ITIH6Q6UXX5 1313 aa9.28□□□□□ -0.92
TPM3-201ENST00000271850 URB1O60287 2271 aaKnown RBP9.28□□□□□ -0.92
TPM3-201ENST00000271850 DOCK9Q9BZ29 2069 aa9.27□□□□□ -0.93
TPM3-201ENST00000271850 ASXL3Q9C0F0 2248 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms