RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 PPP2R2AP63151 447 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 HTRA4P83105 476 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-201ENST00000266589 COG7P83436 770 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 RING1Q06587 406 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 TWF1Q12792 350 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 PLD1Q13393 1074 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 VEPH1Q14D04 833 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 PARP6Q2NL67 630 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 EMC10Q5UCC4 262 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 ZNF534Q76KX8 674 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 TADA2BQ86TJ2 420 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 IGDCC3Q8IVU1 814 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 ZNF683Q8IZ20 524 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 AGGF1Q8N302 714 aaeCLIP11.87□□□□□ -0.51
SCAF11-201ENST00000266589 ATPAF2Q8N5M1 289 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 ARFGAP2Q8N6H7 521 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 RTL3Q8N8U3 475 aaKnown RBP11.87□□□□□ -0.51
SCAF11-201ENST00000266589 NACA2Q9H009 215 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 ZBP1Q9H171 429 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 CXXC1Q9P0U4 656 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-201ENST00000266589 IGSF9Q9P2J2 1179 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 DNMT3LQ9UJW3 386 aa11.87□□□□□ -0.51
SCAF11-201ENST00000266589 DOCK4Q8N1I0 1966 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 ZNF840PA6NDX5 716 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 TEX28O15482 410 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 CDH16O75309 829 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 LINC00271P0C7V0 271 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 ATP2A2P16615 1042 aaKnown RBP11.86□□□□□ -0.51
SCAF11-201ENST00000266589 ATP5C1P36542 298 aaKnown RBP11.86□□□□□ -0.51
SCAF11-201ENST00000266589 KPNA1P52294 538 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-201ENST00000266589 ZBTB17Q13105 803 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 CBLBQ13191 982 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 TNFAIP8L3Q5GJ75 292 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 SNX30Q5VWJ9 437 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 RAP1GAP2Q684P5 730 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 NUGGCQ68CJ6 796 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 LRRC31Q6UY01 552 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 ARHGAP36Q6ZRI8 547 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 C3orf62Q6ZUJ4 267 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 ZNF276Q8N554 614 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
SCAF11-201ENST00000266589 MYRFLQ96LU7 910 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 CAPS2Q9BXY5 557 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 SLC39A8Q9C0K1 460 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 MCOLN1Q9GZU1 580 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 EIF2B3Q9NR50 452 aaKnown RBP11.86□□□□□ -0.51
SCAF11-201ENST00000266589 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCAF11-201ENST00000266589 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-201ENST00000266589 PPARGC1AQ9UBK2 798 aaKnown RBP11.86□□□□□ -0.51
SCAF11-201ENST00000266589 INSL6Q9Y581 213 aa11.86□□□□□ -0.51
SCAF11-201ENST00000266589 WASH4PA8MWX3 477 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 POC1B-GALNT4F8VUJ3 575 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 ZBTB24O43167 697 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-201ENST00000266589 TSHRP16473 764 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 ATP5DP30049 168 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 GRIA1P42261 906 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 MAGEA3P43357 314 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 IRAK1P51617 712 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 SARNPP82979 210 aaKnown RBP11.85□□□□□ -0.51
SCAF11-201ENST00000266589 CDK16Q00536 496 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 CREMQ03060 361 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 PPARDQ03181 441 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 ZNF33AQ06730 810 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 TMEM240Q5SV17 173 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 HECTD3Q5T447 861 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 TTC19Q6DKK2 380 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-201ENST00000266589 TFAP2DQ7Z6R9 452 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 NLRP14Q86W24 1093 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 TCEAL8Q8IYN2 117 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 C7orf61Q8IZ16 206 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 TRMT2BQ96GJ1 504 aaKnown RBP11.85□□□□□ -0.51
SCAF11-201ENST00000266589 AGAP3Q96P47 875 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 VAT1Q99536 393 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 ZYG11BQ9C0D3 744 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 XAB2Q9HCS7 855 aaKnown RBP11.85□□□□□ -0.51
SCAF11-201ENST00000266589 TRPM5Q9NZQ8 1165 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 FNIP2Q9P278 1114 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 STK39Q9UEW8 545 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 TBK1Q9UHD2 729 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 RSPH14Q9UHP6 348 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 LGALS13Q9UHV8 139 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 RABGEF1Q9UJ41 708 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 TRHDEQ9UKU6 1024 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 HBS1LQ9Y450 684 aaKnown RBP11.85□□□□□ -0.51
SCAF11-201ENST00000266589 INSL5Q9Y5Q6 135 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 IGLV3-10A0A075B6K4 115 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 COCHO43405 550 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 SHOX2O60902 331 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-201ENST00000266589 LILRB3O75022 631 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 CTSAP10619 480 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 RHOQP17081 205 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 CCNCP24863 283 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 GCAP28676 217 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 KCNQ1P51787 676 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 GNGT1P63211 74 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 TEX44Q53QW1 395 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 ALFQ53S48 1182 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 AFMIDQ63HM1 303 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 ITPRIPL1Q6GPH6 555 aa11.85□□□□□ -0.51
SCAF11-201ENST00000266589 FBXL22Q6P050 247 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms