RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 EPS8L2Q9H6S3 715 aa16.64■□□□□ 0.25
GPC1-201ENST00000264039 ITGB5P18084 799 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 VARSP26640 1264 aaKnown RBP16.63■□□□□ 0.25
GPC1-201ENST00000264039 NKX2-5P52952 324 aaPredicted RBP16.63■□□□□ 0.25
GPC1-201ENST00000264039 MS4A2Q01362 244 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 SNAPC2Q13487 334 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 DNASE1L3Q13609 305 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 NFIL3Q16649 462 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 ZFYVE19Q96K21 471 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 KPNA4O00629 521 aaPredicted RBP16.63■□□□□ 0.25
GPC1-201ENST00000264039 MED7O43513 233 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 EXTL3O43909 919 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 PLIN3O60664 434 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 DAB1O75553 588 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 RFPL1O75677 317 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 HDCP19113 662 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 CRHR1P34998 444 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 PHKA2P46019 1235 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 GABRB2P47870 512 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 CD97P48960 835 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 DGCR6Q14129 220 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 BNIPLQ7Z465 357 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 CCDC103Q8IW40 242 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 PAF1Q8N7H5 531 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 UBR7Q8N806 425 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 GLMNQ92990 594 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 FIZ1Q96SL8 496 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 OSBPL11Q9BXB4 747 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 SLC38A10Q9HBR0 1119 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 BFARQ9NZS9 450 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 MICAL3Q7RTP6 2002 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 TNS2Q63HR2 1409 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 KCNK1O00180 336 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 HNRNPLP14866 589 aaKnown RBP eCLIP16.63■□□□□ 0.25
GPC1-201ENST00000264039 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
GPC1-201ENST00000264039 ADAM17P78536 824 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 GTF2BQ00403 316 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 OLIG1Q8TAK6 271 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 ISOC1Q96CN7 298 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 DACH2Q96NX9 599 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 RTKNQ9BST9 563 aa16.63■□□□□ 0.25
GPC1-201ENST00000264039 APOBEC3GQ9HC16 384 aaKnown RBP16.63■□□□□ 0.25
GPC1-201ENST00000264039 RUVBL2Q9Y230 463 aaKnown RBP16.63■□□□□ 0.25
GPC1-201ENST00000264039 TAF4O00268 1085 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 ALBP02768 609 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 CCNA2P20248 432 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 SPRP35270 261 aaPredicted RBP16.62■□□□□ 0.25
GPC1-201ENST00000264039 NUMBP49757 651 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 LSM12Q3MHD2 195 aaKnown RBP16.62■□□□□ 0.25
GPC1-201ENST00000264039 DHFR2Q86XF0 187 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 SLC4A11Q8NBS3 891 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 HERC2P3Q9BVR0 1158 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 C1orf21Q9H246 121 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 COPG2Q9UBF2 871 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 NARFQ9UHQ1 456 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 CEPT1Q9Y6K0 416 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 ECM29Q5VYK3 1845 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 GRIN3BO60391 1043 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 SRP72O76094 671 aaKnown RBP16.62■□□□□ 0.25
GPC1-201ENST00000264039 KRT8P05787 483 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 TAP1Q03518 808 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 ZNF568Q3ZCX4 644 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 FAM196AQ6ZSG2 479 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 DDIASQ8IXT1 998 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 RIT2Q99578 217 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 FZD1Q9UP38 647 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 CST3P01034 146 aaPredicted RBP16.62■□□□□ 0.25
GPC1-201ENST00000264039 POLBP06746 335 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 CPOXP36551 454 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 SEPHS1P49903 392 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 ADGRF2Q8IZF7 708 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 PHF21BQ96EK2 531 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 CHST12Q9NRB3 414 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 ABCB10Q9NRK6 738 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 GIMAP4Q9NUV9 329 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 SIRPGQ9P1W8 387 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 POLIQ9UNA4 740 aa16.62■□□□□ 0.25
GPC1-201ENST00000264039 IGLV3-22A0A075B6J6 115 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 GARTP22102 1010 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 HNRNPDQ14103 355 aaKnown RBP16.61■□□□□ 0.25
GPC1-201ENST00000264039 DUOXA2Q1HG44 320 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 TAS2R42Q7RTR8 314 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 KBTBD6Q86V97 674 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 CDKL3Q8IVW4 592 aaPredicted RBP16.61■□□□□ 0.25
GPC1-201ENST00000264039 BSNDQ8WZ55 320 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 ZNF516Q92618 1163 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 ANKRD36BP1Q96IX9 119 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 VCPIP1Q96JH7 1222 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 TAAR1Q96RJ0 339 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 EBNA1BP2Q99848 306 aaKnown RBP16.61■□□□□ 0.25
GPC1-201ENST00000264039 HESX1Q9UBX0 185 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 PCDHA10Q9Y5I2 948 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 SNED1Q8TER0 1413 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 PSMD11O00231 422 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 CEACAM7Q14002 265 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 PHF13Q86YI8 300 aaPredicted RBP16.61■□□□□ 0.25
GPC1-201ENST00000264039 MCPH1Q8NEM0 835 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 NMRAL1Q9HBL8 299 aa16.61■□□□□ 0.25
GPC1-201ENST00000264039 POLE4Q9NR33 117 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms