RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PDCD4Q53EL6 469 aaKnown RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 RSBN1LQ6PCB5 846 aaPredicted RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 ISLR2Q6UXK2 745 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 GPR141Q7Z602 305 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 ZBTB33Q86T24 672 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 CARM1Q86X55 608 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 NSUN6Q8TEA1 469 aaKnown RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 TMEM176AQ96HP8 235 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 QKIQ96PU8 341 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 OR52B2Q96RD2 323 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 CAAP1Q9H8G2 361 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 CYP3A43Q9HB55 503 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF302Q9NR11 478 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 SNX15Q9NRS6 342 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 UTP6Q9NYH9 597 aaKnown RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 PTBP2Q9UKA9 531 aaKnown RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF711Q9Y462 761 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 A0A087WXM4 84 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 ACOT8O14734 319 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 B4GALT4O60513 344 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 MCF2P10911 925 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 HMOX2P30519 316 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 GPD2P43304 727 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 MAGEA12P43365 314 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 RPL14P50914 215 aaKnown RBP12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 MS4A2Q01362 244 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 SPANXN3Q5MJ09 141 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 SCARA3Q6AZY7 606 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 ATG14Q6ZNE5 492 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 UNC5BQ8IZJ1 945 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 RDH11Q8TC12 318 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 ASB9Q96DX5 294 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 NIFKQ9BYG3 293 aaKnown RBP12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 GLIS2Q9BZE0 524 aaPredicted RBP12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF70Q9UC06 446 aaPredicted RBP12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 CPSF3Q9UKF6 684 aaKnown RBP12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 CDYLQ9Y232 598 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 RNF11Q9Y3C5 154 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 KAT6AQ92794 2004 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 SUPT3HO75486 399 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 FAM163BP0C2L3 166 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF12P17014 697 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 HMGB2P26583 209 aaKnown RBP12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 TTKP33981 857 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 PHKA2P46019 1235 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 PKNOX1P55347 436 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 SNX16P57768 344 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 PRKAA1Q13131 559 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 BAATQ14032 418 aaPredicted RBP12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 PDK1Q15118 436 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 CDO1Q16878 200 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 C15orf59Q2T9L4 293 aaPredicted RBP12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 PPM1JQ5JR12 505 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 SH3PXD2AQ5TCZ1 1133 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 TTC30AQ86WT1 665 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 COX4I2Q96KJ9 171 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 TMEM79Q9BSE2 394 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 NRBP2Q9NSY0 501 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 PACSIN3Q9UKS6 424 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 KIAA1257Q9ULG3 409 aa12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 MAFBQ9Y5Q3 323 aaPredicted RBP12.66□□□□□ -0.38
CHMP2B-201ENST00000263780 ARID2Q68CP9 1835 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 MYOCOSA0A1B0GUC4 107 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 KANSL1LA0AUZ9 987 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 RNASEH2AO75792 299 aaKnown RBP12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 CYP2F1P24903 491 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 ADORA2AP29274 412 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 SDC4P31431 198 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 TRAP1Q12931 704 aaKnown RBP12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 IKBKEQ14164 716 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 C16orf72Q14CZ0 275 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 LSM12Q3MHD2 195 aaKnown RBP12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 ZBED5Q49AG3 693 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 KCTD21Q4G0X4 260 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 FKBP1CQ5VVH2 108 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 MAPK15Q8TD08 544 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 GIPC3Q8TF64 312 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 BORCS5Q969J3 196 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 COQ10BQ9H8M1 238 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 NGRNQ9NPE2 291 aaKnown RBP12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 ARHGEF38Q9NXL2 777 aa12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 SUCOQ9UBS9 1254 aaKnown RBP12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 IPO11Q9UI26 975 aaKnown RBP12.65□□□□□ -0.38
CHMP2B-201ENST00000263780 A0A0A0MRY4 1105 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 PIK3R2O00459 728 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 XPO1O14980 1071 aaKnown RBP12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 MAGEB3O15480 346 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 STAMBPO95630 424 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 HOXC6P09630 235 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 HADHAP40939 763 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 GRIA1P42261 906 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 PPIL2Q13356 520 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 CAPSQ13938 189 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 PTK2BQ14289 1009 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 PAOXQ6QHF9 649 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 KCNT2Q6UVM3 1135 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 TTC39CQ8N584 583 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 SPATA13Q96N96 652 aa12.65□□□□□ -0.39
CHMP2B-201ENST00000263780 TSNARE1Q96NA8 513 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms