RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 DEFA1P59665 94 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 DEFA3P59666 94 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 GPM6BQ13491 265 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 CYLC2Q14093 348 aaPredicted RBP8.59□□□□□ -1.03
CCNT1-201ENST00000261900 PEG10Q86TG7 708 aaKnown RBP8.59□□□□□ -1.03
CCNT1-201ENST00000261900 NEK7Q8TDX7 302 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 SGSM3Q96HU1 749 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ETNK1Q9HBU6 452 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 CDH9Q9ULB4 789 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ST3GAL5Q9UNP4 418 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 MAPRE3Q9UPY8 281 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 TULP4Q9NRJ4 1543 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 O00370 1275 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 MGRN1O60291 552 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 CCNB2O95067 398 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 CYP1A1P04798 512 aaPredicted RBP8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ELFN1P0C7U0 828 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 RARGP13631 454 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 CLCN6P51797 869 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCNT1-201ENST00000261900 FOXM1Q08050 763 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 CNGA3Q16281 694 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 CELF3Q5SZQ8 465 aaKnown RBP8.59□□□□□ -1.03
CCNT1-201ENST00000261900 NIPA1Q7RTP0 329 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ST13P5Q8NFI4 369 aaPredicted RBP8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ZMAT2Q96NC0 199 aaKnown RBP8.59□□□□□ -1.03
CCNT1-201ENST00000261900 RUSC1Q9BVN2 902 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 SLC39A8Q9C0K1 460 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ARHGEF3Q9NR81 526 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 NOP53Q9NZM5 478 aaKnown RBP8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ERVK-11Q9UQG0 969 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 PNPLA6Q8IY17 1366 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ESYT3A0FGR9 886 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 MAP3K6O95382 1288 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ECDO95905 644 aaPredicted RBP8.59□□□□□ -1.03
CCNT1-201ENST00000261900 HSPA14Q0VDF9 509 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 TROAPQ12815 778 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 STK4Q13043 487 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 LONRF1Q17RB8 773 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 AP5B1Q2VPB7 878 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 SLC30A10Q6XR72 485 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 BTN2A1Q7KYR7 527 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 CAMK1DQ8IU85 385 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 DENND1CQ8IV53 801 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 SETD7Q8WTS6 366 aaKnown RBP8.59□□□□□ -1.03
CCNT1-201ENST00000261900 E2F7Q96AV8 911 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 FERD3LQ96RJ6 166 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 TM6SF2Q9BZW4 377 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 CCDC134Q9H6E4 229 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 POPDC2Q9HBU9 364 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 NCKIPSDQ9NZQ3 722 aa8.59□□□□□ -1.03
CCNT1-201ENST00000261900 ARHGEF5Q12774 1597 aa8.59□□□□□ -1.04
CCNT1-201ENST00000261900 PTPRMP28827 1452 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 TRIM49D1C9J1S8 452 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 MCIDASD6RGH6 385 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 SCAMP3O14828 347 aaKnown RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 INHAP05111 366 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 YBX3P16989 372 aaKnown RBP eCLIP8.58□□□□□ -1.042e-6■■□□□ 11.7
CCNT1-201ENST00000261900 IDSP22304 550 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 VARSP26640 1264 aaKnown RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 TALDO1P37837 337 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 DYNC1I2Q13409 638 aaKnown RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 CSHL1Q14406 222 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 DACT2Q5SW24 774 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 TTC29Q8NA56 475 aaPredicted RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 ELL3Q9HB65 397 aaPredicted RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 CYP4F12Q9HCS2 524 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.58□□□□□ -1.041e-6■■■■□ 23.5
CCNT1-201ENST00000261900 KIAA1522Q9P206 1035 aaPredicted RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 ENOPH1Q9UHY7 261 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 ALG6Q9Y672 507 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 PEX12O00623 359 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 CHGBP05060 677 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 ITPKBP27987 946 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 WASP42768 502 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 ELP6Q0PNE2 266 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 POU6F1Q14863 301 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 FBXO39Q8N4B4 442 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 MAB21L3Q8N8X9 362 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 MYCBPAPQ8TBZ2 947 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 IGDCC4Q8TDY8 1250 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 TRPC4APQ8TEL6 797 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 PROX1Q92786 737 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 PPP1R10Q96QC0 940 aaKnown RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 UBP1Q9NZI7 540 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 FAM205AQ6ZU69 1335 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 FGF10O15520 208 aaPredicted RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 WBP4O75554 376 aaKnown RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 CYTH1Q15438 398 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 NFIL3Q16649 462 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 ERMARDQ5T6L9 678 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 SPPL2AQ8TCT8 520 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 MCRS1Q96EZ8 462 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 SLC38A3Q99624 504 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 FAM126AQ9BYI3 521 aaPredicted RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 ULBP1Q9BZM6 244 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 ASB8Q9H765 288 aa8.58□□□□□ -1.04
CCNT1-201ENST00000261900 AVENQ9NQS1 362 aaPredicted RBP8.58□□□□□ -1.04
CCNT1-201ENST00000261900 ATAD3AQ9NVI7 634 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms