RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 CNPY1Q3B7I2 92 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 PPM1LQ5SGD2 360 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 CERCAMQ5T4B2 595 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 ACAD11Q709F0 780 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 ZNF534Q76KX8 674 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 ZSCAN18Q8TBC5 510 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 QKIQ96PU8 341 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 ILKAPQ9H0C8 392 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 FAM96AQ9H5X1 160 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 PLAC1Q9HBJ0 212 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 COL4A5P29400 1685 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 ZBTB42B2RXF5 422 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 MDM4O15151 490 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 CHRNGP07510 517 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 PFKMP08237 780 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 AOC1P19801 751 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 NR2C2P49116 596 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 NUMBP49757 651 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 KLF10Q13118 480 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 SEPT6Q14141 434 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 NCBP2-AS2Q69YL0 99 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 LAYNQ6UX15 382 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 ARHGAP18Q8N392 663 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 OR52B2Q96RD2 323 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 SIK2Q9H0K1 926 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 Q9H521 79 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 ENDOD1O94919 500 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 TPI1P60174 286 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 BST2Q10589 180 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 LAMB3Q13751 1172 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 PLPPR4Q7Z2D5 763 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 SATL1Q86VE3 508 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 ZNF354CQ86Y25 554 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 PPWD1Q96BP3 646 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 CELF6Q96J87 481 aaKnown RBP16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 PPME1Q9Y570 386 aa16.56■□□□□ 0.24
SNCAIP-202ENST00000261368 HUS1O60921 280 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 ITGAXP20702 1163 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 PROZP22891 400 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 PMLP29590 882 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 BAG6P46379 1132 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 SERPINB8P50452 374 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 BCAT1P54687 386 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 SLC12A2P55011 1212 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 FOLH1Q04609 750 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 MPP3Q13368 585 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 OSMRQ99650 979 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 VPS33BQ9H267 617 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 GPAMQ9HCL2 828 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 EMCNQ9ULC0 261 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 TRIM13O60858 407 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 LGALS2P05162 132 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 UQCRBP14927 111 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 ALDH1A3P47895 512 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 RAB27AP51159 221 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 GEN1Q17RS7 908 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 LRRC23Q53EV4 343 aaPredicted RBP16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 RARS2Q5T160 578 aaKnown RBP16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 TMEM198Q66K66 360 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 TTC39CQ8N584 583 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 FAM156AQ8NDB6 213 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 APBA2Q99767 749 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 DNAI2Q9GZS0 605 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 LRRC40Q9H9A6 602 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 NMRAL1Q9HBL8 299 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 DDX18Q9NVP1 670 aaKnown RBP16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 NFKBIEO00221 500 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 OR6B1O95007 311 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 PIGNO95427 931 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 SRGAP2BP0DMP2 458 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 CHRM1P11229 460 aaPredicted RBP16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 CDK7P50613 346 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 SEMA5AQ13591 1074 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 CMPK2Q5EBM0 449 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 TMCO4Q5TGY1 634 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 ZNF567Q8N184 647 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 OMDQ99983 421 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 FAM192AQ9GZU8 254 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 ASB3Q9Y575 518 aa16.55■□□□□ 0.24
SNCAIP-202ENST00000261368 TK2O00142 265 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 COG7P83436 770 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 DYNC1I2Q13409 638 aaKnown RBP16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 CCNIQ14094 377 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 ZNF618Q5T7W0 954 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 PDZD4Q76G19 769 aaPredicted RBP16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 FBXW8Q8N3Y1 598 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 RCN3Q96D15 328 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 ETAA1Q9NY74 926 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 STAP1Q9ULZ2 295 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 SORCS3Q9UPU3 1222 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 RUVBL2Q9Y230 463 aaKnown RBP16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 PIN4Q9Y237 131 aaKnown RBP16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 C22orf31O95567 290 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 JCHAINP01591 159 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 LTFP02788 710 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 C2P06681 752 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 NDUFV1P49821 464 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 SEL1L3Q68CR1 1132 aa16.54■□□□□ 0.24
SNCAIP-202ENST00000261368 FSTL4Q6MZW2 842 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms