RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ZNF840PA6NDX5 716 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 CA8P35219 290 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 FDFT1P37268 417 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 GRIA1P42261 906 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 MCUQ8NE86 351 aa22.95■■□□□ 1.26
SIX3-201ENST00000260653 TWF1Q12792 350 aa22.94■■□□□ 1.26
SIX3-201ENST00000260653 PLD1Q13393 1074 aa22.94■■□□□ 1.26
SIX3-201ENST00000260653 CCDC38Q502W7 563 aa22.94■■□□□ 1.26
SIX3-201ENST00000260653 TMEM240Q5SV17 173 aa22.94■■□□□ 1.26
SIX3-201ENST00000260653 RAP1GAP2Q684P5 730 aa22.94■■□□□ 1.26
SIX3-201ENST00000260653 RTL3Q8N8U3 475 aaKnown RBP22.94■■□□□ 1.26
SIX3-201ENST00000260653 PDZD8Q8NEN9 1154 aa22.94■■□□□ 1.26
SIX3-201ENST00000260653 CCDC77Q9BR77 488 aa22.94■■□□□ 1.26
SIX3-201ENST00000260653 FRMD8Q9BZ67 464 aaPredicted RBP22.94■■□□□ 1.26
SIX3-201ENST00000260653 ZBP1Q9H171 429 aa22.94■■□□□ 1.26
SIX3-201ENST00000260653 SLC12A6Q9UHW9 1150 aa22.94■■□□□ 1.26
SIX3-201ENST00000260653 EXOC1LA0A1B0GW35 172 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 IVLP07476 585 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 KCNQ1P51787 676 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 TNFAIP8L3Q5GJ75 292 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 PDCD7Q8N8D1 485 aaKnown RBP22.93■■□□□ 1.26
SIX3-201ENST00000260653 OVCA2Q8WZ82 227 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 DPF3Q92784 378 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 SLC39A8Q9C0K1 460 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 LILRB3O75022 631 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 AGTP01019 485 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 SPATA31D3P0C874 917 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 ELF1P32519 619 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 ATP5C1P36542 298 aaKnown RBP22.93■■□□□ 1.26
SIX3-201ENST00000260653 SKOR1P84550 965 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 RING1Q06587 406 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 TAF12Q16514 161 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 PARP6Q2NL67 630 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 EMC10Q5UCC4 262 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 SNX30Q5VWJ9 437 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 TTC19Q6DKK2 380 aaPredicted RBP22.93■■□□□ 1.26
SIX3-201ENST00000260653 SPATA31D4Q6ZUB0 917 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 C3orf62Q6ZUJ4 267 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 TFAP2DQ7Z6R9 452 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 NLRP14Q86W24 1093 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 PALM2Q8IXS6 379 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 C7orf61Q8IZ16 206 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 KLHL23Q8NBE8 558 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 MYRFLQ96LU7 910 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 PSD3Q9NYI0 1048 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 IGSF9Q9P2J2 1179 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 DNMT3LQ9UJW3 386 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 INSL6Q9Y581 213 aa22.93■■□□□ 1.26
SIX3-201ENST00000260653 ATPAF2Q8N5M1 289 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 LZTR1Q8N653 840 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 AGAP3Q96P47 875 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 CDK5RAP1Q96SZ6 601 aaKnown RBP22.92■■□□□ 1.26
SIX3-201ENST00000260653 NACA2Q9H009 215 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 TBK1Q9UHD2 729 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 INSL5Q9Y5Q6 135 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 NYNRINQ9P2P1 1898 aaKnown RBP22.92■■□□□ 1.26
SIX3-201ENST00000260653 MTSS1O43312 755 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 CNTN5O94779 1100 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 GCAP28676 217 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 MAGEA3P43357 314 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 VEPH1Q14D04 833 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 ALFQ53S48 1182 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 FBXL22Q6P050 247 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 TCEAL8Q8IYN2 117 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 ZSCAN18Q8TBC5 510 aaPredicted RBP22.92■■□□□ 1.26
SIX3-201ENST00000260653 CLP1Q92989 425 aaKnown RBP22.92■■□□□ 1.26
SIX3-201ENST00000260653 IGSF8Q969P0 613 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 PLXNA4Q9HCM2 1894 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 FNIP2Q9P278 1114 aa22.92■■□□□ 1.26
SIX3-201ENST00000260653 ZBTB24O43167 697 aaPredicted RBP22.91■■□□□ 1.26
SIX3-201ENST00000260653 COCHO43405 550 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 ZNF189O75820 626 aaPredicted RBP22.91■■□□□ 1.26
SIX3-201ENST00000260653 CNPP09543 421 aaKnown RBP22.91■■□□□ 1.26
SIX3-201ENST00000260653 SYN1P17600 705 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 HECTD3Q5T447 861 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 GORASP1Q9BQQ3 440 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 ZYG11BQ9C0D3 744 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.91■■□□□ 1.26
SIX3-201ENST00000260653 TRPM5Q9NZQ8 1165 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 FOXO6A8MYZ6 492 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 CDH16O75309 829 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 PIAS1O75925 651 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 CTSAP10619 480 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 CD68P34810 354 aaPredicted RBP22.91■■□□□ 1.26
SIX3-201ENST00000260653 PHBP35232 272 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 PPP2R2AP63151 447 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 COG7P83436 770 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 NADSYN1Q6IA69 706 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 LRRC31Q6UY01 552 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 CYP4X1Q8N118 509 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 ZNF276Q8N554 614 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 TRMT2BQ96GJ1 504 aaKnown RBP22.91■■□□□ 1.26
SIX3-201ENST00000260653 PRMT1Q99873 361 aaKnown RBP22.91■■□□□ 1.26
SIX3-201ENST00000260653 CAPS2Q9BXY5 557 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 EURLQ9NYK6 297 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.91■■□□□ 1.26
SIX3-201ENST00000260653 RABGEF1Q9UJ41 708 aa22.91■■□□□ 1.26
SIX3-201ENST00000260653 HBS1LQ9Y450 684 aaKnown RBP22.91■■□□□ 1.26
SIX3-201ENST00000260653 IGLV3-10A0A075B6K4 115 aa22.9■■□□□ 1.26
SIX3-201ENST00000260653 GOLGA6L7A0A1B0GV03 622 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms