RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SERGEFQ9UGK8 458 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 KLK13Q9UKR3 277 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 PCDHGC3Q9UN70 934 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 CABIN1Q9Y6J0 2220 aa19.65■□□□□ 0.74
TM6SF1-201ENST00000258909 FAM47DPA6NHR8 397 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 MOCS3O95396 460 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 PRKCSHP14314 528 aaPredicted RBP19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 KRT9P35527 623 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 STK19P49842 368 aaPredicted RBP19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 ECT2LQ008S8 904 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 NME3Q13232 169 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 TRIP6Q15654 476 aaKnown RBP19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 HLA-BQ31612 363 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 C9orf64Q5T6V5 341 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 MMAAQ8IVH4 418 aaKnown RBP19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 CCAR2Q8N163 923 aaKnown RBP19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 CHCHD4Q8N4Q1 142 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 PCED1AQ9H1Q7 454 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 PABPC3Q9H361 631 aaKnown RBP19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 FBXL12Q9NXK8 326 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 SLC12A6Q9UHW9 1150 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 FNDC3AQ9Y2H6 1198 aaKnown RBP19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 PCDHB9Q9Y5E1 797 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 TMEM131Q92545 1883 aa19.64■□□□□ 0.73
TM6SF1-201ENST00000258909 MID1O15344 667 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 HSF2BPO75031 334 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 PDGFRAP16234 1089 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 ABCB4P21439 1286 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 MZF1P28698 734 aaPredicted RBP19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 GGCXP38435 758 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 MATKP42679 507 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 PTPN20Q4JDL3 420 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 VWA3BQ502W6 1294 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 EFHC1Q5JVL4 640 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 RNF219Q5W0B1 726 aaPredicted RBP19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 OLFML1Q6UWY5 402 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 C11orf57Q6ZUT1 292 aaPredicted RBP19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 TMEM121BQ9BXQ6 578 aaPredicted RBP19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 NDST4Q9H3R1 872 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 SYNCQ9H7C4 482 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 SGK2Q9HBY8 427 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 TM9SF3Q9HD45 589 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 NCKAP1Q9Y2A7 1128 aa19.63■□□□□ 0.73
TM6SF1-201ENST00000258909 A0A1W2PP55 124 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 KCNK3O14649 394 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 RNASEH1O60930 286 aaKnown RBP19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 GLI1P08151 1106 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 SRPRAP08240 638 aaKnown RBP19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 CCR1P32246 355 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 IRAK1P51617 712 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 AFF3P51826 1226 aaKnown RBP19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 CENPCQ03188 943 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 CST6Q15828 149 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 KIF19Q2TAC6 998 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 MIIPQ5JXC2 388 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 DPY19L2P1Q6NXN4 242 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 FBXL22Q6P050 247 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 PNPLA1Q8N8W4 532 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 SETD7Q8WTS6 366 aaKnown RBP19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 IGSF8Q969P0 613 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 NOX5Q96PH1 765 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 TUBGCP2Q9BSJ2 902 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 TM7SF3Q9NS93 570 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 ASNSD1Q9NWL6 643 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 SNX11Q9Y5W9 270 aa19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 NYNRINQ9P2P1 1898 aaKnown RBP19.62■□□□□ 0.73
TM6SF1-201ENST00000258909 PLXNA2O75051 1894 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 PES1O00541 588 aaKnown RBP19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 RNASEH2AO75792 299 aaKnown RBP19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 CER1O95813 267 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 IGHV4-34P06331 123 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 SLC2A3P11169 496 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 VAV1P15498 845 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 SLC6A3Q01959 620 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 RAPGEF1Q13905 1077 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 FAM114A1Q8IWE2 563 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 STK40Q8N2I9 435 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 KDM1BQ8NB78 822 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 GATA6Q92908 595 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 RPRD1AQ96P16 312 aaPredicted RBP19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 FAM129BQ96TA1 746 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 NEUROG2Q9H2A3 272 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 VANGL2Q9ULK5 521 aa19.61■□□□□ 0.73
TM6SF1-201ENST00000258909 EDDM13A0A1B0GTR0 161 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 TARSL2A2RTX5 802 aaKnown RBP19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 CD27P26842 260 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 SLC8A1P32418 973 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 PSMD8P48556 350 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 GALCP54803 685 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 RNASE9P60153 205 aaKnown RBP19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 KCNMA1Q12791 1236 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 AUHQ13825 339 aaKnown RBP19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 HNRNPDQ14103 355 aaKnown RBP19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 ARID5BQ14865 1188 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 DRAP1Q14919 205 aaPredicted RBP19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 KCNT1Q5JUK3 1230 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 RABGAP1LQ5R372 815 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 KIAA0895LQ68EN5 471 aa19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 CXorf57Q6NSI4 855 aaKnown RBP19.6■□□□□ 0.73
TM6SF1-201ENST00000258909 IL27RAQ6UWB1 636 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms