RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CLPTM1LQ96KA5 538 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 LRRC37BQ96QE4 947 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 FAM167BQ9BTA0 163 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 APOL5Q9BWW9 433 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 TSSK1BQ9BXA7 367 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 PSME4Q14997 1843 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 UBA6A0AVT1 1052 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 CFLARO15519 480 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 ADAM12O43184 909 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 FYNP06241 537 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 TCN1P20061 433 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 PCSK1P29120 753 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 HNRNPH1P31943 449 aaKnown RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 DAOAP59103 153 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 PLIN5Q00G26 463 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 ITGA9Q13797 1035 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 CNGA3Q16281 694 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 ARL13BQ3SXY8 428 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 CDKL3Q8IVW4 592 aaPredicted RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 THEM5Q8N1Q8 247 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 ATPAF2Q8N5M1 289 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 LRRC52Q8N7C0 313 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 KLHDC9Q8NEP7 349 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 CERS4Q9HA82 394 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 CREBZFQ9NS37 354 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 UTP6Q9NYH9 597 aaKnown RBP9.33□□□□□ -0.92
CKAP2-201ENST00000258607 OTOFQ9HC10 1997 aa9.33□□□□□ -0.92
CKAP2-201ENST00000258607 KIF13BQ9NQT8 1826 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 NEMP2A6NFY4 417 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 AURKAO14965 403 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 ALOX15BO15296 676 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 SKAP2O75563 359 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-201ENST00000258607 PRSS56P0CW18 603 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 CKBP12277 381 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 OR1D2P34982 312 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 TAF10Q12962 218 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 NR1H3Q13133 447 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 SLC12A1Q13621 1099 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 TCEA2Q15560 299 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 SLC25A52Q3SY17 297 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 SLC26A9Q7LBE3 791 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 MICAL1Q8TDZ2 1067 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 PPP4R1Q8TF05 950 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 SOCS4Q8WXH5 440 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 ZNF317Q96PQ6 595 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-201ENST00000258607 FERMT1Q9BQL6 677 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 SMG9Q9H0W8 520 aaKnown RBP9.32□□□□□ -0.92
CKAP2-201ENST00000258607 MANSC1Q9H8J5 431 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 BPIFA1Q9NP55 256 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 KCTD3Q9Y597 815 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 PTCH2Q9Y6C5 1203 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 NUP214P35658 2090 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-201ENST00000258607 EME2A4GXA9 379 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-201ENST00000258607 J3KR12 359 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 KRT37O76014 449 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 ITGB6P18564 788 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 STIP1P31948 543 aaKnown RBP9.32□□□□□ -0.92
CKAP2-201ENST00000258607 GBP1P32455 592 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 NOS2P35228 1153 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 MPP1Q00013 466 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 GALNT3Q14435 633 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 MBTPS1Q14703 1052 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 ZBTB6Q15916 424 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 FAM187BQ17R55 369 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 CFAP157Q5JU67 520 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 FYB2Q5VWT5 728 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 RTN4RL1Q86UN2 441 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-201ENST00000258607 ESAMQ96AP7 390 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 PHF21BQ96EK2 531 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 SMARCD1Q96GM5 515 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 TM6SF2Q9BZW4 377 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 ZDHHC4Q9NPG8 344 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 TBC1D13Q9NVG8 400 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 IQANK1A0A1B0GTG1 560 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 MBLAC1A4D2B0 266 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-201ENST00000258607 E9PBE3 544 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 XPO1O14980 1071 aaKnown RBP9.32□□□□□ -0.92
CKAP2-201ENST00000258607 KLHL41O60662 606 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 BAG2O95816 211 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 KRT16P08779 473 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 NMBRP28336 390 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 SNX16P57768 344 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 CAV1Q03135 178 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 MGAT5Q09328 741 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 N4BP2L1Q5TBK1 243 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-201ENST00000258607 RIPOR1Q6ZS17 1223 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 TPGS1Q6ZTW0 290 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 EPAS1Q99814 870 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 NCAPGQ9BPX3 1015 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 EBF4Q9BQW3 602 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 UNC93B1Q9H1C4 597 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 ZFP69BQ9UJL9 534 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 LOXHD1Q8IVV2 1947 aa9.32□□□□□ -0.92
CKAP2-201ENST00000258607 CBX4O00257 560 aa9.31□□□□□ -0.92
CKAP2-201ENST00000258607 SETSIPP0DME0 302 aa9.31□□□□□ -0.92
CKAP2-201ENST00000258607 CYBAP13498 195 aa9.31□□□□□ -0.92
CKAP2-201ENST00000258607 PCK1P35558 622 aa9.31□□□□□ -0.92
CKAP2-201ENST00000258607 PNPLA4P41247 253 aa9.31□□□□□ -0.92
CKAP2-201ENST00000258607 RPS24P62847 133 aaKnown RBP9.31□□□□□ -0.92
CKAP2-201ENST00000258607 UBAP2LQ14157 1087 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms