RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CCL5P13501 91 aa19.19■□□□□ 0.66
PDLIM4-201ENST00000253754 IRX4P78413 519 aa19.19■□□□□ 0.66
PDLIM4-201ENST00000253754 CRYMQ14894 314 aa19.19■□□□□ 0.66
PDLIM4-201ENST00000253754 PARP6Q2NL67 630 aa19.19■□□□□ 0.66
PDLIM4-201ENST00000253754 NTAN1Q96AB6 310 aa19.19■□□□□ 0.66
PDLIM4-201ENST00000253754 COLEC11Q9BWP8 271 aa19.19■□□□□ 0.66
PDLIM4-201ENST00000253754 EIF2B3Q9NR50 452 aaKnown RBP19.19■□□□□ 0.66
PDLIM4-201ENST00000253754 ALDH1A2O94788 518 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 ITGB1P05556 798 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 MLNP12872 115 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 CDK7P50613 346 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 CDK16Q00536 496 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 NIPAL4Q0D2K0 466 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 SCAPQ12770 1279 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 CLNKQ7Z7G1 428 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 OR52K1Q8NGK4 314 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 MTBPQ96DY7 904 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 SLC9A7Q96T83 725 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 TMEM120AQ9BXJ8 343 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 TKTL2Q9H0I9 626 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 FBXO6Q9NRD1 293 aaPredicted RBP19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 MAGED2Q9UNF1 606 aaPredicted RBP19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 MRPL42Q9Y6G3 142 aaKnown RBP19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 KIAA0100Q14667 2235 aaKnown RBP19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 C9IYK1 514 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 CD300LGQ6UXG3 332 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 TAC4Q86UU9 113 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 OR10T2Q8NGX3 314 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 LRMDAQ9H2I8 198 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 HEY2Q9UBP5 337 aa19.18■□□□□ 0.66
PDLIM4-201ENST00000253754 FAM237BA0A1B0GVD1 139 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 CAPN15O75808 1086 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 DLDP09622 509 aaKnown RBP19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 ERVK-10P10266 1014 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 PGAM1P18669 254 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 GMPRP36959 345 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 ARFIP2P53365 341 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 BST1Q10588 318 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 CTC1Q2NKJ3 1217 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 RTN4RL1Q86UN2 441 aaPredicted RBP19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 LRRTM3Q86VH5 581 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 SLC7A6OSQ96CW6 309 aaPredicted RBP19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 IGSF9Q9P2J2 1179 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 ZBTB24O43167 697 aaPredicted RBP19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 ALDOAP04075 364 aaKnown RBP19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 ODC1P11926 461 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 PCSK1P29120 753 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 SERPINB3P29508 390 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 ZBTB17Q13105 803 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 CHI3L2Q15782 390 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 C16orf46Q6P387 395 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 PACS1Q6VY07 963 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 FAM126BQ8IXS8 530 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 SCAMP5Q8TAC9 235 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 ZNF398Q8TD17 642 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 CELF6Q96J87 481 aaKnown RBP19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 FERMT1Q9BQL6 677 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 WDCPQ9H6R7 721 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 PRDM16Q9HAZ2 1276 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 CSNK1G1Q9HCP0 422 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 OR12D3Q9UGF7 316 aa19.17■□□□□ 0.66
PDLIM4-201ENST00000253754 RPL9P32969 192 aaKnown RBP19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 TMPRSS15P98073 1019 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 RIPK1Q13546 671 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 ZCCHC23Q6ZST2 131 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 MARK2Q7KZI7 788 aaKnown RBP19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 LRRC8DQ7L1W4 858 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 AGAP11Q8TF27 550 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 PGAP3Q96FM1 320 aaPredicted RBP19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 FCRL3Q96P31 734 aaPredicted RBP19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 C20orf27Q9GZN8 174 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 MKS1Q9NXB0 559 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 OGDHLQ9ULD0 1010 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 L3MBTL1Q9Y468 752 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 TDRD15B5MCY1 1934 aaKnown RBP19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 E2F8A0AVK6 867 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 TPP1O14773 563 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 PQBP1O60828 265 aaKnown RBP19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 LRIG2O94898 1065 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 SELPP16109 830 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 EPHB2P29323 1055 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 CD68P34810 354 aaPredicted RBP19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 CRHR1P34998 444 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 SERPINB9P50453 376 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 ATN1P54259 1190 aaPredicted RBP19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 INTS6LQ5JSJ4 861 aaKnown RBP19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 APOL2Q9BQE5 337 aa19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 MARCOQ9UEW3 520 aaPredicted RBP19.16■□□□□ 0.66
PDLIM4-201ENST00000253754 MYL2P10916 166 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 SKIP12755 728 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 PGFP49763 221 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 AIF1P55008 147 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 PPIDQ08752 370 aaKnown RBP19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 ARL13BQ3SXY8 428 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 TTC7BQ86TV6 843 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 RASSF3Q86WH2 238 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 STKLD1Q8NE28 680 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 E2F7Q96AV8 911 aa19.15■□□□□ 0.66
PDLIM4-201ENST00000253754 RGS18Q9NS28 235 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms