RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ARMCX6Q7L4S7 300 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 ZNF683Q8IZ20 524 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 RXFP2Q8WXD0 754 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 TTYH3Q9C0H2 523 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 RAB6CQ9H0N0 254 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 MTG2Q9H4K7 406 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 C2CD4BA6NLJ0 364 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 PRR5-ARHGAP8B1AHC4 643 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 GDF9O60383 454 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 ENDOD1O94919 500 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 CAVIN2O95810 425 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 CCDC172P0C7W6 258 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 PDGFRAP16234 1089 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 MZF1P28698 734 aaPredicted RBP23.67■■□□□ 1.38
LSM4-201ENST00000252816 RDXP35241 583 aaKnown RBP23.67■■□□□ 1.38
LSM4-201ENST00000252816 NUMBP49757 651 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 GSCP56915 257 aaPredicted RBP23.67■■□□□ 1.38
LSM4-201ENST00000252816 ARHGAP8P85298 464 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 ATP11AP98196 1134 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 RPL6Q02878 288 aaKnown RBP23.67■■□□□ 1.38
LSM4-201ENST00000252816 C15orf59Q2T9L4 293 aaPredicted RBP23.67■■□□□ 1.38
LSM4-201ENST00000252816 SKOR2Q2VWA4 1001 aaPredicted RBP23.67■■□□□ 1.38
LSM4-201ENST00000252816 CCDC14Q49A88 953 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 ARTNQ5T4W7 220 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 SH3PXD2AQ5TCZ1 1133 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 TCEAL6Q6IPX3 200 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 METTL3Q86U44 580 aaKnown RBP23.67■■□□□ 1.38
LSM4-201ENST00000252816 FAM131BQ86XD5 332 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 CACUL1Q86Y37 369 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 DEFB119Q8N690 84 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 OR52K2Q8NGK3 314 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 OR2T3Q8NH03 318 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 TCEAL3Q969E4 200 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 SIPA1Q96FS4 1042 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 PRSS16Q9NQE7 514 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 VPS45Q9NRW7 570 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 RXFP3Q9NSD7 469 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 DLL3Q9NYJ7 618 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 USP36Q9P275 1121 aaKnown RBP23.67■■□□□ 1.38
LSM4-201ENST00000252816 ERVW-1Q9UQF0 538 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 GON4LQ3T8J9 2241 aa23.67■■□□□ 1.38
LSM4-201ENST00000252816 ASLP04424 464 aa23.66■■□□□ 1.38
LSM4-201ENST00000252816 CALB1P05937 261 aa23.66■■□□□ 1.38
LSM4-201ENST00000252816 TPM4P67936 248 aa23.66■■□□□ 1.38
LSM4-201ENST00000252816 SPDYCQ5MJ68 293 aa23.66■■□□□ 1.38
LSM4-201ENST00000252816 SLC36A4Q6YBV0 504 aa23.66■■□□□ 1.38
LSM4-201ENST00000252816 CYP2U1Q7Z449 544 aa23.66■■□□□ 1.38
LSM4-201ENST00000252816 ITM2CQ9NQX7 267 aa23.66■■□□□ 1.38
LSM4-201ENST00000252816 TMEM51Q9NW97 253 aa23.66■■□□□ 1.38
LSM4-201ENST00000252816 TAS2R14Q9NYV8 317 aa23.66■■□□□ 1.38
LSM4-201ENST00000252816 PAXBP1Q9Y5B6 917 aa23.66■■□□□ 1.38
LSM4-201ENST00000252816 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.65■■□□□ 1.38
LSM4-201ENST00000252816 TCRBV5S1A1TA0A578 114 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 CNTN5O94779 1100 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 MOCS3O95396 460 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 KRT3P12035 628 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 RFC1P35251 1148 aaPredicted RBP23.65■■□□□ 1.38
LSM4-201ENST00000252816 TPMTP51580 245 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 C1QBPQ07021 282 aaKnown RBP23.65■■□□□ 1.38
LSM4-201ENST00000252816 ASIC2Q16515 512 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 CDO1Q16878 200 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 ALFQ53S48 1182 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 C3orf20Q8ND61 904 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 PIGKQ92643 395 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 PRCCQ92733 491 aaPredicted RBP23.65■■□□□ 1.38
LSM4-201ENST00000252816 ALG14Q96F25 216 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 C1orf74Q96LT6 269 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 AIPL1Q9NZN9 384 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 NUP205Q92621 2012 aa23.65■■□□□ 1.38
LSM4-201ENST00000252816 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.64■■□□□ 1.37
LSM4-201ENST00000252816 AP5Z1O43299 807 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 C7P10643 843 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 SDC4P31431 198 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 PBX1P40424 430 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 PLK1P53350 603 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 ECT2LQ008S8 904 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 ZNF177Q13360 481 aaPredicted RBP23.64■■□□□ 1.37
LSM4-201ENST00000252816 SLC12A1Q13621 1099 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 ACAD10Q6JQN1 1059 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 SLC41A1Q8IVJ1 513 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 HAPLN3Q96S86 360 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 SELENOOQ9BVL4 669 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 TMEM74BQ9NUR3 256 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 SUN2Q9UH99 717 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 SLCO3A1Q9UIG8 710 aa23.64■■□□□ 1.37
LSM4-201ENST00000252816 DRGXA6NNA5 263 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 PATE3B3GLJ2 98 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 GOLGA6L19H0YKK7 550 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 FOXD2O60548 495 aaPredicted RBP23.63■■□□□ 1.37
LSM4-201ENST00000252816 CLDN11O75508 207 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 SRPRAP08240 638 aaKnown RBP23.63■■□□□ 1.37
LSM4-201ENST00000252816 TNFAIP3P21580 790 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 ITPKAP23677 461 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 CD6P30203 668 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 PTPN9P43378 593 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 STK19P49842 368 aaPredicted RBP23.63■■□□□ 1.37
LSM4-201ENST00000252816 CDH4P55283 916 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 UBASH3AP57075 661 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 ST8SIA6P61647 398 aa23.63■■□□□ 1.37
LSM4-201ENST00000252816 HNRNPA1L2Q32P51 320 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms