RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SLC8A1P32418 973 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 PGGT1BP53609 377 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 PDE1BQ01064 536 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 PRKCZQ05513 592 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 CLNKQ7Z7G1 428 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 ALYREFQ86V81 257 aaKnown RBP16.16■□□□□ 0.18
LRFN1-201ENST00000248668 ZNF669Q96BR6 464 aaPredicted RBP16.16■□□□□ 0.18
LRFN1-201ENST00000248668 ZCWPW1Q9H0M4 648 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 ETAA1Q9NY74 926 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 RCOR3Q9P2K3 495 aaPredicted RBP16.16■□□□□ 0.18
LRFN1-201ENST00000248668 ZNF180Q9UJW8 692 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 CDH9Q9ULB4 789 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 C2CD2LO14523 706 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 GPR182O15218 404 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 MOCS2O96007 188 aaPredicted RBP16.16■□□□□ 0.18
LRFN1-201ENST00000248668 JCHAINP01591 159 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 CCNB1P14635 433 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 GJA9P57773 515 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 RPL10AP62906 217 aaKnown RBP16.16■□□□□ 0.18
LRFN1-201ENST00000248668 CAP1Q01518 475 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 CACNB2Q08289 660 aaPredicted RBP16.16■□□□□ 0.18
LRFN1-201ENST00000248668 CERCAMQ5T4B2 595 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 MFSD14CQ5VZR4 134 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 LRRC8BQ6P9F7 803 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 C4orf22Q6V702 233 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 KDELC2Q7Z4H8 507 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 TMEM86AQ8N2M4 240 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 FCRL3Q96P31 734 aaPredicted RBP16.16■□□□□ 0.18
LRFN1-201ENST00000248668 FAM167BQ9BTA0 163 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 C20orf27Q9GZN8 174 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 MOCS1Q9NZB8 636 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 ZFATQ9P243 1243 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 SFMBT1Q9UHJ3 866 aa16.16■□□□□ 0.18
LRFN1-201ENST00000248668 DFFAO00273 331 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 FBXO21O94952 628 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 KCNA4P22459 653 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 PCSK1P29120 753 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 CPA2P48052 419 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 GLUD2P49448 558 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 PARP6Q2NL67 630 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 ARHGAP36Q6ZRI8 547 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 CMC1Q7Z7K0 106 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 PPP1R14CQ8TAE6 165 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 E2F7Q96AV8 911 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 KCNK13Q9HB14 408 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 ZNF358Q9NW07 568 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 ODC1P11926 461 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 CCDC15Q0P6D6 951 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 PAFAH1B3Q15102 231 aaKnown RBP16.15■□□□□ 0.18
LRFN1-201ENST00000248668 RBBP5Q15291 538 aaKnown RBP16.15■□□□□ 0.18
LRFN1-201ENST00000248668 CAPRIN2Q6IMN6 1127 aaKnown RBP16.15■□□□□ 0.18
LRFN1-201ENST00000248668 PACS1Q6VY07 963 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 BHLHA9Q7RTU4 235 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 BNIPLQ7Z465 357 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 ARL8BQ9NVJ2 186 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 TXNDC16Q9P2K2 825 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 GIT1Q9Y2X7 761 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 LYPLA1O75608 230 aaPredicted RBP16.15■□□□□ 0.18
LRFN1-201ENST00000248668 ANP32DO95626 131 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 ALDOAP04075 364 aaKnown RBP16.15■□□□□ 0.18
LRFN1-201ENST00000248668 NFKB1P19838 968 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 ARL13BQ3SXY8 428 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 CHSY1Q86X52 802 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 SCN4BQ8IWT1 228 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 MFSD3Q96ES6 412 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 AGAP2Q99490 1192 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 SH3GL3Q99963 347 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 GORASP1Q9BQQ3 440 aa16.15■□□□□ 0.18
LRFN1-201ENST00000248668 ABT1Q9ULW3 272 aaKnown RBP16.15■□□□□ 0.18
LRFN1-201ENST00000248668 OTOP3Q7RTS5 596 aa16.14■□□□□ 0.17
LRFN1-201ENST00000248668 LONP2Q86WA8 852 aa16.14■□□□□ 0.17
LRFN1-201ENST00000248668 SLC7A6OSQ96CW6 309 aaPredicted RBP16.14■□□□□ 0.17
LRFN1-201ENST00000248668 TBC1D10AQ9BXI6 508 aa16.14■□□□□ 0.17
LRFN1-201ENST00000248668 MKI67P46013 3256 aaKnown RBP16.14■□□□□ 0.17
LRFN1-201ENST00000248668 DLDP09622 509 aaKnown RBP16.14■□□□□ 0.17
LRFN1-201ENST00000248668 SAT1P21673 171 aa16.14■□□□□ 0.17
LRFN1-201ENST00000248668 CD68P34810 354 aaPredicted RBP16.14■□□□□ 0.17
LRFN1-201ENST00000248668 LPIN1Q14693 890 aa16.14■□□□□ 0.17
LRFN1-201ENST00000248668 N4BP2L1Q5TBK1 243 aaPredicted RBP16.14■□□□□ 0.17
LRFN1-201ENST00000248668 OVOS1Q6IE37 1185 aa16.14■□□□□ 0.17
LRFN1-201ENST00000248668 METTL23Q86XA0 190 aa16.14■□□□□ 0.17
LRFN1-201ENST00000248668 DQX1Q8TE96 717 aaKnown RBP16.14■□□□□ 0.17
LRFN1-201ENST00000248668 CDKL2Q92772 493 aa16.14■□□□□ 0.17
LRFN1-201ENST00000248668 TSPAN18Q96SJ8 248 aa16.14■□□□□ 0.17
LRFN1-201ENST00000248668 B4GALT3O60512 393 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 HAUS5O94927 633 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 PGAM1P18669 254 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 RAB41Q5JT25 222 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 PSTKQ8IV42 348 aaKnown RBP16.13■□□□□ 0.17
LRFN1-201ENST00000248668 ACSS2Q9NR19 701 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 GRIK1P39086 918 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 PDE1CQ14123 709 aaPredicted RBP16.13■□□□□ 0.17
LRFN1-201ENST00000248668 SPATA22Q8NHS9 363 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 EPAS1Q99814 870 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 CAB39LQ9H9S4 337 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 VANGL2Q9ULK5 521 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 PRG3Q9Y2Y8 225 aaPredicted RBP16.13■□□□□ 0.17
LRFN1-201ENST00000248668 PDE4DIPQ5VU43 2346 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 SCN10AQ9Y5Y9 1956 aa16.13■□□□□ 0.17
LRFN1-201ENST00000248668 DIAPH2O60879 1101 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms