RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 GOLGA8MH3BSY2 632 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 RNF103O00237 685 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 GRM6O15303 877 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 ACSL4O60488 711 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 GABRR2P28476 465 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 FDFT1P37268 417 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 CLCN4P51793 760 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 ZNF33AQ06730 810 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 HIF1AQ16665 826 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 FAM109BQ6ICB4 259 aaPredicted RBP19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 FBXL22Q6P050 247 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 LRRC49Q8IUZ0 686 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 TP53INP2Q8IXH6 220 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 CCDC13Q8IYE1 715 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 ATPAF2Q8N5M1 289 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 COLQQ9Y215 455 aaPredicted RBP19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 TACR2P21452 398 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 CDC25CP30307 473 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 LMAN1P49257 510 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 EIF3BP55884 814 aaKnown RBP19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 PID1Q7Z2X4 250 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 PDIK1LQ8N165 341 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 AZIN2Q96A70 460 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 PWWP2AQ96N64 755 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 VAT1Q99536 393 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 DDX50Q9BQ39 737 aaKnown RBP19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 RNF38Q9H0F5 515 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 CDC42EP4Q9H3Q1 356 aaKnown RBP19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 ETNK1Q9HBU6 452 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 SAYSD1Q9NPB0 183 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 ASAH2Q9NR71 780 aa19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 KLHL8Q9P2G9 620 aaPredicted RBP19.22■□□□□ 0.67
TNFSF9-201ENST00000245817 IGLV3-10A0A075B6K4 115 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 DRGXA6NNA5 263 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 C1RP00736 705 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 IRF1P10914 325 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 HDCP19113 662 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 CORO1AP31146 461 aaKnown RBP19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 GPM6BQ13491 265 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 ANKRD22Q5VYY1 191 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 TMEM150AQ86TG1 271 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 RELL1Q8IUW5 271 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 DENND1CQ8IV53 801 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 ZNF683Q8IZ20 524 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 EXOC4Q96A65 974 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 PRMT1Q99873 361 aaKnown RBP19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 CORO1BQ9BR76 489 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 KLF16Q9BXK1 252 aaPredicted RBP19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 FRMD8Q9BZ67 464 aaPredicted RBP19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 ATXN3LQ9H3M9 355 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 GKN1Q9NS71 199 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 TMEM248Q9NWD8 314 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 DPP7Q9UHL4 492 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 PLXNA4Q9HCM2 1894 aa19.21■□□□□ 0.67
TNFSF9-201ENST00000245817 AGPSO00116 658 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 KCNK1O00180 336 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 CCL16O15467 120 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 RIPK2O43353 540 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 STC2O76061 302 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 FGF19O95750 216 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 APRTP07741 180 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 CCNCP24863 283 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 MAGEA4P43358 317 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 NDST2P52849 883 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 SARNPP82979 210 aaKnown RBP19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 SLC29A2Q14542 456 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 KCNJ11Q14654 390 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 CEP85LQ5SZL2 805 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 FAXCQ5TGI0 409 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 TIGD7Q6NT04 549 aaPredicted RBP19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 ELMSAN1Q6PJG2 1045 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 TFAP2DQ7Z6R9 452 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 LGI2Q8N0V4 545 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 PHACTR1Q9C0D0 580 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 SLC39A8Q9C0K1 460 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 IL21Q9HBE4 155 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 MAN1C1Q9NR34 630 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 MSRAQ9UJ68 235 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 TRHDEQ9UKU6 1024 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 GOLGA6L7A0A1B0GV03 622 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 EIF3HO15372 352 aaKnown RBP eCLIP19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 NEBLO76041 1014 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 ARHGEF15O94989 841 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 TTC4O95801 387 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 MYL4P12829 197 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 IRS1P35568 1242 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 ERVK-21P61565 698 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 PDIA2Q13087 525 aaKnown RBP19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 PARP6Q2NL67 630 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 RABGAP1LQ5R372 815 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 TXNDC8Q6A555 127 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 NADSYN1Q6IA69 706 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 SPRED2Q7Z698 418 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 NLRP14Q86W24 1093 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 HS6ST3Q8IZP7 471 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 ARL14EPQ8N8R7 260 aaPredicted RBP19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 IGSF8Q969P0 613 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 PKNOX2Q96KN3 472 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 TTC25Q96NG3 672 aa19.2■□□□□ 0.66
TNFSF9-201ENST00000245817 TSGA13Q96PP4 275 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms