RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SIKE1Q9BRV8 207 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 NAT9Q9BTE0 207 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 PRDM16Q9HAZ2 1276 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 PIGVQ9NUD9 493 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 TMEM216Q9P0N5 145 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 TXNDC16Q9P2K2 825 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 RPS6KL1Q9Y6S9 549 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 NUP205Q92621 2012 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 SF3B1O75533 1304 aaKnown RBP eCLIP14.75□□□□□ -0.05
HIF3A-202ENST00000244303 F8W8V4 182 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 KCNK1O00180 336 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 EEF2KO00418 725 aaKnown RBP14.75□□□□□ -0.05
HIF3A-202ENST00000244303 PROCP04070 461 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 NPR3P17342 541 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 AOC1P19801 751 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 TYK2P29597 1187 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 PSEN2P49810 448 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 LILRA4P59901 499 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 ADAM17P78536 824 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 DEUP1Q05D60 604 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 DPYSQ14117 519 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 PAFAH1B3Q15102 231 aaKnown RBP14.75□□□□□ -0.05
HIF3A-202ENST00000244303 PCBP1Q15365 356 aaKnown RBP eCLIP14.75□□□□□ -0.05
HIF3A-202ENST00000244303 RIPOR1Q6ZS17 1223 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 HFE2Q6ZVN8 426 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 OR52K1Q8NGK4 314 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 FCRL3Q96P31 734 aaPredicted RBP14.75□□□□□ -0.05
HIF3A-202ENST00000244303 HNRNPABQ99729 332 aaKnown RBP14.75□□□□□ -0.05
HIF3A-202ENST00000244303 IGSF9Q9P2J2 1179 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 ZNF212Q9UDV6 495 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 SLC7A8Q9UHI5 535 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 STAP1Q9ULZ2 295 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 DPPA5A6NC42 116 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 FAM72CH0Y354 149 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 DCLK1O15075 740 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 XPOTO43592 962 aaKnown RBP14.74□□□□□ -0.05
HIF3A-202ENST00000244303 CIB2O75838 187 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 SERPINE1P05121 402 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 C6orf222P0C671 652 aaPredicted RBP14.74□□□□□ -0.05
HIF3A-202ENST00000244303 ARRB2P32121 409 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 GP5P40197 560 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 MRPS35P82673 323 aaKnown RBP14.74□□□□□ -0.05
HIF3A-202ENST00000244303 KLC1Q07866 573 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 CCL14Q16627 93 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 FAM72AQ5TYM5 149 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 FAM72DQ6L9T8 149 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 PAQR9Q6ZVX9 377 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 MAVSQ7Z434 540 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 CMC1Q7Z7K0 106 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 FAM72BQ86X60 149 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 RNF169Q8NCN4 708 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
HIF3A-202ENST00000244303 FAM136AQ96C01 138 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 AGAP3Q96P47 875 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 SORT1Q99523 831 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 DNAI2Q9GZS0 605 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 C1orf21Q9H246 121 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 RRAGCQ9HB90 399 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 LRRC4Q9HBW1 653 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 PNPOQ9NVS9 261 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 ZNF358Q9NW07 568 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 COPG2Q9UBF2 871 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 SORCS3Q9UPU3 1222 aa14.74□□□□□ -0.05
HIF3A-202ENST00000244303 EME2A4GXA9 379 aaPredicted RBP14.73□□□□□ -0.05
HIF3A-202ENST00000244303 HAS3O00219 553 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 TREHO43280 583 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 USP12O75317 370 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 MYL3P08590 195 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 F7P08709 466 aaPredicted RBP14.73□□□□□ -0.05
HIF3A-202ENST00000244303 KCNE1P15382 129 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 WARSP23381 471 aaKnown RBP14.73□□□□□ -0.05
HIF3A-202ENST00000244303 AXLP30530 894 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 RABGGTBP53611 331 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 IRF5Q13568 498 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 SNX17Q15036 470 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 TRMT5Q32P41 509 aaKnown RBP14.73□□□□□ -0.05
HIF3A-202ENST00000244303 XKR4Q5GH76 650 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 SPANXN3Q5MJ09 141 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 RABGAP1LQ5R372 815 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 UBXN11Q5T124 520 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 C6orf163Q5TEZ5 329 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 CLEC20AQ6ZU45 233 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 WNT8BQ93098 351 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 ATXN7L3BQ96GX2 97 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 SH3GL3Q99963 347 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 GORASP1Q9BQQ3 440 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 STN1Q9H668 368 aaKnown RBP14.73□□□□□ -0.05
HIF3A-202ENST00000244303 KLHL8Q9P2G9 620 aaPredicted RBP14.73□□□□□ -0.05
HIF3A-202ENST00000244303 APOBEC2Q9Y235 224 aaKnown RBP14.73□□□□□ -0.05
HIF3A-202ENST00000244303 LRCH1Q9Y2L9 728 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 DOCK3Q8IZD9 2030 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 SMIM24O75264 130 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 CPOXP36551 454 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 GARSP41250 739 aaKnown RBP14.73□□□□□ -0.05
HIF3A-202ENST00000244303 ACTR3P61158 418 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 INSCQ1MX18 579 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 CST9Q5W186 159 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 RSPH3Q86UC2 560 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 SIX6OS1Q8N1H7 587 aa14.73□□□□□ -0.05
HIF3A-202ENST00000244303 ARRDC4Q8NCT1 418 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms