RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ARID1BQ8NFD5 2236 aaPredicted RBP14.32□□□□□ -0.12
DDX39A-201ENST00000242776 TRIM49BA6NDI0 452 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 IKBKBO14920 756 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 RNASEH1O60930 286 aaKnown RBP14.31□□□□□ -0.12
DDX39A-201ENST00000242776 GLDCP23378 1020 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 NR2F2P24468 414 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 RAD23BP54727 409 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 TPM4P67936 248 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 FKBP3Q00688 224 aaKnown RBP14.31□□□□□ -0.12
DDX39A-201ENST00000242776 ADIGQ0VDE8 80 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 KCNJ12Q14500 433 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 CST6Q15828 149 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 RAB41Q5JT25 222 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 ADGRF1Q5T601 910 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 ANKRD40Q6AI12 368 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 TTI2Q6NXR4 508 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 MMS22LQ6ZRQ5 1243 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 BHLHA9Q7RTU4 235 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 CARNMT1Q8N4J0 409 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 UBA3Q8TBC4 463 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 ENOX1Q8TC92 643 aaKnown RBP14.31□□□□□ -0.12
DDX39A-201ENST00000242776 SEMA4DQ92854 862 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 TMEM176AQ96HP8 235 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 FBRSQ9HAH7 460 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 LRRC4Q9HBW1 653 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 CISHQ9NSE2 258 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 MGAQ8IWI9 3026 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 LRRC72A6NJI9 287 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 YJEFN3A6XGL0 299 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 TTC34A8MYJ7 566 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 E7ENQ6 273 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 CETN3O15182 167 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 KRT10P13645 584 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 KRT13P13646 458 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 LCP1P13796 627 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 EPHA8P29322 1005 aaPredicted RBP14.31□□□□□ -0.12
DDX39A-201ENST00000242776 SLC6A4P31645 630 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 SLC8A1P32418 973 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 CSKP41240 450 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 CTSOP43234 321 aaPredicted RBP14.31□□□□□ -0.12
DDX39A-201ENST00000242776 PMS1P54277 932 aaKnown RBP14.31□□□□□ -0.12
DDX39A-201ENST00000242776 SLC8A3P57103 927 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 PDE4CQ08493 712 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 RTP5Q14D33 572 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 BSPRYQ5W0U4 402 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 PCSK4Q6UW60 755 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 KIAA0907Q7Z7F0 614 aaPredicted RBP14.31□□□□□ -0.12
DDX39A-201ENST00000242776 MFN1Q8IWA4 741 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 SPACA3Q8IXA5 215 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 AOPEPQ8N6M6 819 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.31□□□□□ -0.124e-10■■■■□ 21.2
DDX39A-201ENST00000242776 OR14C36Q8NHC7 312 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 TMEM174Q8WUU8 243 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 FGF11Q92914 225 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 LGMNQ99538 433 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 NRSN2Q9GZP1 204 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 OLA1Q9NTK5 396 aaKnown RBP14.31□□□□□ -0.12
DDX39A-201ENST00000242776 HBS1LQ9Y450 684 aaKnown RBP14.31□□□□□ -0.12
DDX39A-201ENST00000242776 CEP83Q9Y592 693 aa14.31□□□□□ -0.12
DDX39A-201ENST00000242776 A0A1W2PR77 199 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 GOLGA6L19H0YKK7 550 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 J3QKU1 62 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 C1SP09871 688 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 MAT2AP31153 395 aaKnown RBP14.3□□□□□ -0.12
DDX39A-201ENST00000242776 ARRB1P49407 418 aaPredicted RBP14.3□□□□□ -0.12
DDX39A-201ENST00000242776 TLE3Q04726 772 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 ADAM9Q13443 819 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 USP30Q70CQ3 517 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 FAM114A1Q8IWE2 563 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 FAM186BQ8IYM0 893 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 CFAP52Q8N1V2 620 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 ANKRD52Q8NB46 1076 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 OR2T34Q8NGX1 318 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 SNIP1Q8TAD8 396 aaKnown RBP14.3□□□□□ -0.12
DDX39A-201ENST00000242776 TSC1Q92574 1164 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 MYEOVQ96EZ4 313 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 EEF2KMTQ96G04 330 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 MYO19Q96H55 970 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 CEP63Q96MT8 703 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 CPNE5Q9HCH3 593 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 CLCA2Q9UQC9 943 aa14.3□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D3DA0A087WVF3 549 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D3IA0A087WXS9 549 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D3EA0A087X179 549 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D3KA0A087X1G2 549 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TEX51A0A1B0GUA7 166 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D3FA6NER0 549 aaPredicted RBP14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D3LB9A6J9 549 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TLR4O00206 839 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 TBC1D3HP0C7X1 549 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 EPB41P11171 864 aaKnown RBP14.29□□□□□ -0.12
DDX39A-201ENST00000242776 CD19P15391 556 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 ACTN2P35609 894 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 RGS7P49802 495 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 NXPH1P58417 271 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 PPP2CBP62714 309 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 PPP2CAP67775 309 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 INSM1Q01101 510 aaPredicted RBP14.29□□□□□ -0.12
DDX39A-201ENST00000242776 KCNH2Q12809 1159 aa14.29□□□□□ -0.12
DDX39A-201ENST00000242776 POM121L1PQ3SYA9 428 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms